RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 CNDP1Q96KN2 507 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 IMMP1LQ96LU5 166 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 HAUS8Q9BT25 410 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 MKL2Q9ULH7 1088 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 SLC22A7Q9Y694 548 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 HIVEP3Q5T1R4 2406 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 TSPAN12O95859 305 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 AHSGP02765 367 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 F7P08709 466 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 ENO2P09104 434 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 HIST1H2AGP0C0S8 130 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 MYBL2P10244 700 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 HIST1H2ADP20671 130 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 IVDP26440 423 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 GRK3P35626 688 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 AGTR2P50052 363 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 IL2P60568 153 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 ARG2P78540 354 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 DHX9Q08211 1270 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 MORF4L2Q15014 288 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 PLAG1Q6DJT9 500 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 NIPAL1Q6NVV3 410 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 PAQR3Q6TCH7 311 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 LINC00696Q6ZRV3 163 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 STRA8Q7Z7C7 330 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 PLD3Q8IV08 490 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 OR4K1Q8NGD4 311 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 BRIX1Q8TDN6 353 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 METTL21AQ8WXB1 218 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 ATL1Q8WXF7 558 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 PDLIM5Q96HC4 596 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 HIST1H2AHQ96KK5 128 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 RUNDC3BQ96NL0 473 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 NDNQ99608 321 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 HIST1H2AJQ99878 128 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 H2AFJQ9BTM1 129 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 YIPF2Q9BWQ6 316 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 VN1R1Q9GZP7 353 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 PTGFRNQ9P2B2 879 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 C19orf25Q9UFG5 118 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 ASIC3Q9UHC3 531 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 TEKT2Q9UIF3 430 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 ADAMTS6Q9UKP5 1117 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 ICE1Q9Y2F5 2266 aa12.02□□□□□ -0.49
HNRNPC-221ENST00000555883 CELSR2Q9HCU4 2923 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 POLEQ07864 2286 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 CDK2AP1O14519 115 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 WFS1O76024 890 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 CLDN1O95832 211 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 STSP08842 583 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 SLC35G6P0C7Q6 338 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 NPPBP16860 134 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 BCL6P41182 706 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 EFNA3P52797 238 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 CDKN2DP55273 166 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 PER3P56645 1201 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 EEF1A2Q05639 463 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 ILF2Q12905 390 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 PHKG1Q16816 387 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 SYT16Q17RD7 645 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 TEDDM1Q5T9Z0 273 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 DUPD1Q68J44 220 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 CAPN13Q6MZZ7 669 aaPredicted RBP12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 ASPGQ86U10 573 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 PDIK1LQ8N165 341 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 CATSPER1Q8NEC5 780 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 OR1N1Q8NGS0 311 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 OR9A4Q8NGU2 314 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 OR56A3Q8NH54 315 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 ANKRD7Q92527 254 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 LINGO1Q96FE5 620 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 OR1F2PQ96R84 312 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 CYTH2Q99418 400 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 TRIM54Q9BYV2 358 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 DDX47Q9H0S4 455 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 ANKHQ9HCJ1 492 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 OLAHQ9NV23 265 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 PCDHGB6Q9Y5F9 930 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 DOCK10Q96BY6 2186 aa12.01□□□□□ -0.49
HNRNPC-221ENST00000555883 CRYBG3Q68DQ2 2970 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 HEATR5BQ9P2D3 2071 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 PABPN1LA6NDY0 278 aaKnown RBP12□□□□□ -0.49
HNRNPC-221ENST00000555883 FFAR3O14843 346 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 GPR42O15529 346 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 XCR1P46094 333 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 CCR8P51685 355 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 SKP1P63208 163 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 MAT1AQ00266 395 aaKnown RBP12□□□□□ -0.49
HNRNPC-221ENST00000555883 CBLBQ13191 982 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 PDAP1Q13442 181 aaKnown RBP12□□□□□ -0.49
HNRNPC-221ENST00000555883 NAE1Q13564 534 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 PWP1Q13610 501 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 HERC3Q15034 1050 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 EXT1Q16394 746 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 MSS51Q4VC12 460 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 RBM20Q5T481 1227 aaKnown RBP12□□□□□ -0.49
HNRNPC-221ENST00000555883 STEAP4Q687X5 459 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 FAM45BPQ6NSW5 357 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 H3F3CQ6NXT2 135 aa12□□□□□ -0.49
HNRNPC-221ENST00000555883 CPEB2Q7Z5Q1 589 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms