RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 C9P02748 559 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 GSTM1P09488 218 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CYP2A6P11509 494 aaPredicted RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 ZNF30P17039 623 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 LHCGRP22888 699 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CA8P35219 290 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 HNF4AP41235 474 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 MAPK9P45984 424 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CLK3P49761 638 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 C21orf58P58505 322 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 SLC7A9P82251 487 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 HTRA3P83110 453 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CYP4F8P98187 520 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CREMQ03060 361 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 SLC14A1Q13336 389 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 DGCR6Q14129 220 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CLCA4Q14CN2 919 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 MAD2L1BPQ15013 274 aaPredicted RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 TEAD4Q15561 434 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 UGT8Q16880 541 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CPTPQ5TA50 214 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CBLL1Q75N03 491 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 PRSS48Q7RTY5 328 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 PIWIL3Q7Z3Z3 882 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 DEFB128Q7Z7B8 93 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 PLD3Q8IV08 490 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CHPFQ8IZ52 775 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 NAT16Q8N8M0 369 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 ZNF784Q8NCA9 323 aaPredicted RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 FCGR1BQ92637 280 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 TIFAQ96CG3 184 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 MED8Q96G25 268 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 VMP1Q96GC9 406 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 MTERF1Q99551 399 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 EPYCQ99645 322 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 DUSP26Q9BV47 211 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 BBS2Q9BXC9 721 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 ATG10Q9H0Y0 220 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 PCDH12Q9NPG4 1184 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 RAD18Q9NS91 495 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 ATAD3AQ9NVI7 634 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 THUMPD1Q9NXG2 353 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 B4GALT6Q9UBX8 382 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 NDRG4Q9ULP0 352 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 PAIP2BQ9ULR5 123 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 VPS4AQ9UN37 437 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 PCDHB11Q9Y5F2 797 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 DENND4CQ5VZ89 1909 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 GNG14A0A1W2PPG7 69 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 CARNS1A5YM72 827 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 SCAMP2O15127 329 aaKnown RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 ZSCAN9O15535 394 aaPredicted RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 MAN1A2O60476 641 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 DPM1O60762 260 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 DIRAS1O95057 198 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 LRG1P02750 347 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 MT-ND2P03891 347 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 CATP04040 527 aaKnown RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 SEMG1P04279 462 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 ANXA4P09525 319 aaPredicted RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 C1SP09871 688 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 ALOX5P09917 674 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 BMP1P13497 986 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 CCL5P13501 91 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 CTSOP43234 321 aaPredicted RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 MAP2K4P45985 399 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 CCL23P55773 120 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 PFN3P60673 137 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 VLDLRP98155 873 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 ZXDBP98169 803 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 RELAQ04206 551 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 NPRL3Q12980 569 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 CAMK2GQ13555 558 aaPredicted RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 SPIN4Q56A73 249 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 SYT6Q5T7P8 510 aaPredicted RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 PTCRAQ6ISU1 281 aaPredicted RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 PDE12Q6L8Q7 609 aaKnown RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 FAHD1Q6P587 224 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 BRAT1Q6PJG6 821 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 GDPD4Q6W3E5 623 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 VTCN1Q7Z7D3 282 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 THOC6Q86W42 341 aaKnown RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 VRK3Q8IV63 474 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 P3H2Q8IVL5 708 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 SLC22A15Q8IZD6 547 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 CMTM8Q8IZV2 173 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 ZBTB8BQ8NAP8 495 aaPredicted RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 KLHL23Q8NBE8 558 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 C11orf65Q8NCR3 313 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 NDNFQ8TB73 568 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 TMEM159Q96B96 161 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 SH3KBP1Q96B97 665 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 TAMM41Q96BW9 452 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 REPS1Q96D71 796 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 YIPF6Q96EC8 236 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 FOPNLQ96NB1 174 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 FAM83DQ9H4H8 585 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 TPT1P8Q9HAU6 139 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 BRF2Q9HAW0 419 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 SGK2Q9HBY8 427 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms