RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 PLOD1Q02809 727 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-218ENST00000555628 FASTKQ14296 549 aaKnown RBP8.56□□□□□ -1.04
PRKCH-218ENST00000555628 NR1I3Q14994 352 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 BRD3Q15059 726 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 STX1AQ16623 288 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 SYT16Q17RD7 645 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 SKOR2Q2VWA4 1001 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-218ENST00000555628 CCSMST1Q4G0I0 132 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 KCTD11Q693B1 232 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 FBXO42Q6P3S6 717 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 ZNF449Q6P9G9 518 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 UNC5DQ6UXZ4 953 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 GALNTL5Q7Z4T8 443 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-218ENST00000555628 TMTC1Q8IUR5 882 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 WFDC11Q8NEX6 87 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 SPATA3Q8NHX4 192 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 ASB5Q8WWX0 329 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 CDKN2AIPNLQ96HQ2 116 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 SSBP4Q9BWG4 385 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-218ENST00000555628 ADAM19Q9H013 955 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 C10orf88Q9H8K7 445 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 MKKSQ9NPJ1 570 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-218ENST00000555628 ANO10Q9NW15 660 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 ANKRD10Q9NXR5 420 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 SMARCAL1Q9NZC9 954 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 COQ3Q9NZJ6 369 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 ZC3H7BQ9UGR2 993 aaKnown RBP8.56□□□□□ -1.04
PRKCH-218ENST00000555628 TEKT2Q9UIF3 430 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 RUVBL1Q9Y265 456 aaKnown RBP8.56□□□□□ -1.04
PRKCH-218ENST00000555628 FAM169AQ9Y6X4 670 aa8.56□□□□□ -1.04
PRKCH-218ENST00000555628 hCG_1818297A0A087WSY0 165 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 A0A0J9YVX5 310 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 MROH6A6NGR9 719 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 H0YGG7 62 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 QSOX1O00391 747 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 OR1I1O60431 355 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 ANXA9O76027 345 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 TPOP07202 933 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 HEXBP07686 556 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 SP1P08047 785 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 H2AFZP0C0S5 128 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 C8orf89P0DMQ9 161 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 ERGP11308 486 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 ZNF24P17028 368 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 HOXC12P31275 282 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 TNNT3P45378 269 aaPredicted RBP8.55□□□□□ -1.04
PRKCH-218ENST00000555628 ARF3P61204 181 aaPredicted RBP8.55□□□□□ -1.04
PRKCH-218ENST00000555628 MESDQ14696 234 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 SF1Q15637 639 aaKnown RBP8.55□□□□□ -1.04
PRKCH-218ENST00000555628 HKDC1Q2TB90 917 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 CMPK2Q5EBM0 449 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 CES4AQ5XG92 561 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 TMEM198Q66K66 360 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 Q71RC1 249 aaPredicted RBP8.55□□□□□ -1.04
PRKCH-218ENST00000555628 H2AFVQ71UI9 128 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 BZW1Q7L1Q6 419 aaKnown RBP8.55□□□□□ -1.04
PRKCH-218ENST00000555628 CCDC71Q8IV32 467 aaPredicted RBP8.55□□□□□ -1.04
PRKCH-218ENST00000555628 LGI4Q8N135 537 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 CPSF7Q8N684 471 aaKnown RBP8.55□□□□□ -1.04
PRKCH-218ENST00000555628 TMEM178AQ8NBL3 297 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 SEC16BQ96JE7 1060 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 ZNF354BQ96LW1 612 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 OR2A5Q96R48 311 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 MIPEPQ99797 713 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 ZFYVE21Q9BQ24 234 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 UTP23Q9BRU9 249 aaKnown RBP8.55□□□□□ -1.04
PRKCH-218ENST00000555628 MAK16Q9BXY0 300 aaKnown RBP8.55□□□□□ -1.04
PRKCH-218ENST00000555628 MMP25Q9NPA2 562 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 LMBRD1Q9NUN5 540 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 GNPTGQ9UJJ9 305 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 PLEKHA6Q9Y2H5 1048 aa8.55□□□□□ -1.04
PRKCH-218ENST00000555628 HIVEP2P31629 2446 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 OR51F1A6NGY5 319 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 GABRR3A8MPY1 467 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 HACD1B0YJ81 288 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 P2RX6O15547 441 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 KDM1AO60341 852 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 GYPCP04921 128 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 TMEM253P0C7T8 217 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 RBL1P28749 1068 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 ZBED6P86452 979 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 MAT1AQ00266 395 aaKnown RBP8.54□□□□□ -1.04
PRKCH-218ENST00000555628 TFDP2Q14188 446 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 MEP1AQ16819 746 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 BTBD16Q32M84 506 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 GARNL3Q5VVW2 1013 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 ZNF425Q6IV72 752 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 CEP128Q6ZU80 1094 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 CXXC5Q7LFL8 322 aaKnown RBP8.54□□□□□ -1.04
PRKCH-218ENST00000555628 CPEB2Q7Z5Q1 589 aaKnown RBP8.54□□□□□ -1.04
PRKCH-218ENST00000555628 ANKRD37Q7Z713 158 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 PCGF5Q86SE9 256 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 PAQR7Q86WK9 346 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 EID3Q8N140 333 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 ARMC10Q8N2F6 343 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 CSNK1A1LQ8N752 337 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 SLC35G2Q8TBE7 412 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 TP53INP1Q96A56 240 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 HAUS1Q96CS2 278 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms