RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 MXD3Q9BW11 206 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 GSN-AS1Q9NRJ2 163 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 CHORDC1Q9UHD1 332 aaPredicted RBP2.68□□□□□ -1.98
SNX6-204ENST00000555541 ANAPC2Q9UJX6 822 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 SNX8Q9Y5X2 465 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 TRAV24A0A0B4J272 114 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 hCG_1809904A0A1W2PP81 198 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 A0A1W2PPE2 198 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 A0A1W2PR64 198 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 TCRBV21S2A2A0A5A6 115 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 MTMR11A4FU01 709 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 ZNF840PA6NDX5 716 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 TRAFD1O14545 582 aaPredicted RBP2.67□□□□□ -1.98
SNX6-204ENST00000555541 PHF1O43189 567 aaPredicted RBP2.67□□□□□ -1.98
SNX6-204ENST00000555541 ECE2O60344 883 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 ATP5BP06576 529 aaKnown RBP2.67□□□□□ -1.98
SNX6-204ENST00000555541 PCP11498 1178 aaKnown RBP2.67□□□□□ -1.98
SNX6-204ENST00000555541 SELEP16581 610 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 ALDH1B1P30837 517 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 PCGF2P35227 344 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 LMAN1P49257 510 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 OR1D5P58170 312 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 FKBP3Q00688 224 aaKnown RBP2.67□□□□□ -1.98
SNX6-204ENST00000555541 POU5F1Q01860 360 aaKnown RBP2.67□□□□□ -1.98
SNX6-204ENST00000555541 RASGEF1BQ0VAM2 473 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 CAPRIN1Q14444 709 aaKnown RBP2.67□□□□□ -1.98
SNX6-204ENST00000555541 CTR9Q6PD62 1173 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 RNF130Q86XS8 419 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 GPD1LQ8N335 351 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 LRTM2Q8N967 370 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 KCNE4Q8WWG9 221 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 PROX1Q92786 737 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 PI4K2AQ9BTU6 479 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 KLHL4Q9C0H6 718 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 SLITRK2Q9H156 845 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 ADNPQ9H2P0 1102 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 NSMCE4AQ9NXX6 385 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 HACD3Q9P035 362 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 BAIAP2L1Q9UHR4 511 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 RALGAPA1Q6GYQ0 2036 aa2.67□□□□□ -1.98
SNX6-204ENST00000555541 IGKV6D-21A0A0A0MT36 114 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 EDDM13A0A1B0GTR0 161 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 RPS6KA5O75582 802 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 ZBTB25P24278 435 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 ACTN2P35609 894 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 CETN2P41208 172 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 CCR3P51677 355 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 PRELPP51888 382 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 NDST2P52849 883 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 PRKG2Q13237 762 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 NONOQ15233 471 aaKnown RBP eCLIP2.66□□□□□ -1.98
SNX6-204ENST00000555541 OR4C11Q6IEV9 310 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 VITQ6UXI7 678 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 DET1Q7L5Y6 550 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 OR4N5Q8IXE1 308 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 MAML2Q8IZL2 1156 aaPredicted RBP2.66□□□□□ -1.98
SNX6-204ENST00000555541 TTC30BQ8N4P2 665 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 OR52B6Q8NGF0 335 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 TSACCQ96A04 125 aaPredicted RBP2.66□□□□□ -1.98
SNX6-204ENST00000555541 OTUB1Q96FW1 271 aaPredicted RBP2.66□□□□□ -1.98
SNX6-204ENST00000555541 BTBD9Q96Q07 612 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 CCDC68Q9H2F9 335 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 JPT2Q9H910 190 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 DNAJC4Q9NNZ3 241 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 TBC1D13Q9NVG8 400 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 ANAPC11Q9NYG5 84 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 NLGN3Q9NZ94 848 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 TXNDC16Q9P2K2 825 aa2.66□□□□□ -1.98
SNX6-204ENST00000555541 MAGED1Q9Y5V3 778 aaPredicted RBP2.66□□□□□ -1.98
SNX6-204ENST00000555541 A0A087WWV3 80 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 CLDN4O14493 209 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 SPRY1O43609 319 aaPredicted RBP2.65□□□□□ -1.99
SNX6-204ENST00000555541 CYTIPO60759 359 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 ZNF354AO60765 605 aaPredicted RBP2.65□□□□□ -1.99
SNX6-204ENST00000555541 GSRP00390 522 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 KRT6AP02538 564 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 KRT6BP04259 564 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 KRT6CP48668 564 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 ATP4BP51164 291 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 LIMK1P53667 647 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 ERVK-16P61578 105 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 NDPQ00604 133 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 SNTB1Q13884 538 aaKnown RBP2.65□□□□□ -1.99
SNX6-204ENST00000555541 KIAA0141Q14154 515 aaPredicted RBP2.65□□□□□ -1.99
SNX6-204ENST00000555541 C3AR1Q16581 482 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 TMEM266Q2M3C6 531 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 ALDH1L2Q3SY69 923 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 PRR30Q53SZ7 412 aaPredicted RBP2.65□□□□□ -1.99
SNX6-204ENST00000555541 HYIQ5T013 277 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 ATP1A1-AS1Q5TC04 95 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 SPATA1Q5VX52 437 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 PP632Q6XCG6 107 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 ZBTB49Q6ZSB9 765 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 CENPVQ7Z7K6 275 aaPredicted RBP2.65□□□□□ -1.99
SNX6-204ENST00000555541 ADCK1Q86TW2 530 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 TCEANCQ8N8B7 351 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 AVL9Q8NBF6 648 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 ROBO4Q8WZ75 1007 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 NSMAFQ92636 917 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 LINC00615Q96LM1 132 aaPredicted RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms