RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 LRRN4CLQ8ND94 238 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 ABHD11Q8NFV4 315 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 SLC13A3Q8WWT9 602 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 NEIL2Q969S2 332 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 PTERQ96BW5 349 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 MMABQ96EY8 250 aaPredicted RBP11.53□□□□□ -0.56
SRP54-206ENST00000555317 VPS50Q96JG6 964 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 C10orf90Q96M02 699 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 OR4K3Q96R72 315 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 CCDC77Q9BR77 488 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 CAPS2Q9BXY5 557 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 ACSS2Q9NR19 701 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 DNAJC11Q9NVH1 559 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 ZNF282Q9UDV7 671 aaPredicted RBP11.53□□□□□ -0.56
SRP54-206ENST00000555317 KCNMB2Q9Y691 235 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 TRBC2A0A5B9 178 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 CCDC189A1A4V9 331 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 ARGFXA6NJG6 315 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 MKRN2OSH3BPM6 223 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 CLGNO14967 610 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 P2RX6O15547 441 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 NDUFS4O43181 175 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 CCNT2O60583 730 aaKnown RBP11.52□□□□□ -0.57
SRP54-206ENST00000555317 KERAO60938 352 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 STK16O75716 305 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 IGHEP01854 428 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 C2P06681 752 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 FURINP09958 794 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 GLRBP48167 497 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 HSPA7P48741 367 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 SKP1P63208 163 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 RGS1Q08116 209 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 CDC16Q13042 620 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 DSG2Q14126 1118 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 SSPNQ14714 243 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 PDK4Q16654 411 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 CATSPEREQ5SY80 951 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 UBAP2Q5T6F2 1119 aaKnown RBP11.52□□□□□ -0.57
SRP54-206ENST00000555317 MRPL14Q6P1L8 145 aaKnown RBP11.52□□□□□ -0.57
SRP54-206ENST00000555317 PCSK4Q6UW60 755 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 NXPE4Q6UWF7 544 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 KRT78Q8N1N4 520 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 EIF1ADQ8N9N8 165 aaKnown RBP11.52□□□□□ -0.57
SRP54-206ENST00000555317 PDPRQ8NCN5 879 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 C9orf43Q8TAL5 461 aaPredicted RBP11.52□□□□□ -0.57
SRP54-206ENST00000555317 ZCCHC10Q8TBK6 192 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 KCTD4Q8WVF5 259 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.52□□□□□ -0.57
SRP54-206ENST00000555317 ANKHQ9HCJ1 492 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 IGSF5Q9NSI5 407 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 GEMIN8Q9NWZ8 242 aaKnown RBP11.52□□□□□ -0.57
SRP54-206ENST00000555317 GPRC5BQ9NZH0 403 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 TRPC4Q9UBN4 977 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 CTSFQ9UBX1 484 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 TUBD1Q9UJT1 453 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 ZNF180Q9UJW8 692 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 ZNF462Q96JM2 2506 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 SCN3AQ9NY46 2000 aa11.52□□□□□ -0.57
SRP54-206ENST00000555317 MED13Q9UHV7 2174 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 FASNP49327 2511 aaKnown RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 A0A0A6YYC8 382 aaPredicted RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 TRIM49D1C9J1S8 452 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 I3L1I5 382 aaPredicted RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 UBXN8O00124 270 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 RIPK2O43353 540 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 ZNF500O60304 480 aaPredicted RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 KLF7O75840 302 aaPredicted RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 KLHL2O95198 593 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 ALDOAP04075 364 aaKnown RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 GFAPP14136 432 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 AHRP35869 848 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 GDF5P43026 501 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 SLC6A12P48065 614 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 REEP5Q00765 189 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 IRF9Q00978 393 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 C19orf57Q0VDD7 668 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 ATP1A4Q13733 1029 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 FAM53BQ14153 422 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 ACAP2Q15057 778 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 RBBP5Q15291 538 aaKnown RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 RBBP7Q16576 425 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 NKG7Q16617 165 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 ZXDCQ2QGD7 858 aaPredicted RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 C18orf21Q32NC0 220 aaPredicted RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 LRRC70Q7Z2Q7 622 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 VN1R4Q7Z5H5 301 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 MRGPREQ86SM8 312 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 GSPT2Q8IYD1 628 aaKnown RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 PRSS58Q8IYP2 241 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 CNPY4Q8N129 248 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 EXD3Q8N9H8 876 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 TMEM102Q8N9M5 508 aaPredicted RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 TTLQ8NG68 377 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 OR4K1Q8NGD4 311 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 RHEBL1Q8TAI7 183 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 MIEF2Q96C03 454 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 NXNL1Q96CM4 212 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 SCYL1Q96KG9 808 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 CRB3Q9BUF7 120 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 ING2Q9H160 280 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms