RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 RETSATQ6NUM9 610 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 MILR1Q7Z6M3 343 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 DEPDC4Q8N2C3 294 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 DCAF4L2Q8NA75 395 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 PSD4Q8NDX1 1056 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 DENND6BQ8NEG7 585 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 SUN5Q8TC36 379 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 DNASE1L2Q92874 299 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 WDFY2Q96P53 400 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 OR2A14Q96R47 310 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 PHOX2BQ99453 314 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 SDHCQ99643 169 aaPredicted RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 SPATA9Q9BWV2 254 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 FAM126AQ9BYI3 521 aaPredicted RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 SARS2Q9NP81 518 aaKnown RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 HCSTQ9UBK5 93 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 EVLQ9UI08 416 aaPredicted RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 OARD1Q9Y530 152 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 PCDHB9Q9Y5E1 797 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 PCDHGA6Q9Y5G7 932 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 SLC35F4A4IF30 521 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 H3BQ06 376 aaPredicted RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 EIF3FO00303 357 aaPredicted RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 SEMA3DO95025 777 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 CRYZL1O95825 349 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 ABCB1P08183 1280 aaPredicted RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 PRPS2P11908 318 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 ACPPP15309 386 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 ITGALP20701 1170 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 ALDH9A1P49189 494 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 RGS6P49758 472 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 PTPN5P54829 565 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 P2RX3P56373 397 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 CLDN8P56748 225 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 CREMQ03060 361 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 FCHO2Q0JRZ9 810 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 CSTF3Q12996 717 aaKnown RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 PLD1Q13393 1074 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 CCDC58Q4VC31 144 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 USP39Q53GS9 565 aaKnown RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 SMUG1Q53HV7 270 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 ARMCX4Q5H9R4 360 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 MFSD4BQ5TF39 518 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 LINGO4Q6UY18 593 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 GDPGP1Q6ZNW5 385 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 EIF3MQ7L2H7 374 aaKnown RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 NOXA1Q86UR1 476 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 RNF130Q86XS8 419 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 CCDC71Q8IV32 467 aaPredicted RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 NLGN4XQ8N0W4 816 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 LIX1Q8N485 282 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 ATG16L2Q8NAA4 619 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 TESCQ96BS2 214 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 RNF170Q96K19 258 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 RHNO1Q9BSD3 238 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 CFHR5Q9BXR6 569 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 SLC29A3Q9BZD2 475 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 TNKS2Q9H2K2 1166 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 TBC1D24Q9ULP9 559 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 ABCG2Q9UNQ0 655 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 SAMHD1Q9Y3Z3 626 aaKnown RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 YIPF1Q9Y548 306 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 OR51B4Q9Y5P0 310 aa10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 ZNF106Q9H2Y7 1883 aaKnown RBP10.35□□□□□ -0.75
MTHFD1-210ENST00000555252 MYO1GB0I1T2 1018 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 FFAR2O15552 330 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 AOC2O75106 756 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 SOCS5O75159 536 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 INHAP05111 366 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 RPL17P18621 184 aaKnown RBP10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 MZF1P28698 734 aaPredicted RBP10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 GALK2Q01415 458 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 IL1RL1Q01638 556 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 PCDH1Q08174 1060 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 PTGR1Q14914 329 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 AAK1Q2M2I8 961 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 GPR33Q49SQ1 333 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 FBXO48Q5FWF7 155 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 TIGD3Q6B0B8 471 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 SBSNQ6UWP8 590 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 CBLL1Q75N03 491 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 ARMCX6Q7L4S7 300 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 SERPINA9Q86WD7 417 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 CACTIN-AS1Q8N1I8 211 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 CBARPQ8N350 705 aaPredicted RBP10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 HCAR2Q8TDS4 363 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 UBTD2Q8WUN7 234 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 PIH1D2Q8WWB5 315 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 JPH3Q8WXH2 748 aaPredicted RBP10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 IGSF21Q96ID5 467 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 CDK15Q96Q40 435 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 SMIM14Q96QK8 99 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 NTMT1Q9BV86 223 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 C2orf49Q9BVC5 232 aaPredicted RBP10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 TMEM245Q9H330 911 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 IPPKQ9H8X2 491 aa10.34□□□□□ -0.75
MTHFD1-210ENST00000555252 LRTM1Q9HBL6 345 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms