RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 SUMO2P61956 95 aaKnown RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 CDK3Q00526 305 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 UBE2V1Q13404 147 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 FOXE3Q13461 319 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 MELKQ14680 651 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 TPSAB1Q15661 275 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 CAMK4Q16566 473 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 BEAN1Q3B7T3 259 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 ZC2HC1CQ53FD0 456 aaPredicted RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 ATL3Q6DD88 541 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 KIRREL2Q6UWL6 708 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 ZNF517Q6ZMY9 492 aaPredicted RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 RNF207Q6ZRF8 634 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 CCDC65Q8IXS2 484 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 ARHGAP24Q8N264 748 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 OR1J2Q8NGS2 313 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 VANGL1Q8TAA9 524 aaPredicted RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 PNPT1Q8TCS8 783 aaKnown RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 ASZ1Q8WWH4 475 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 ATL1Q8WXF7 558 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 REPS1Q96D71 796 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 PTCD3Q96EY7 689 aaKnown RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 GPA33Q99795 319 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 TRMOQ9BU70 441 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 MRPL13Q9BYD1 178 aaKnown RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 NMNAT2Q9BZQ4 307 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 SNX25Q9H3E2 840 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 DPAGT1Q9H3H5 408 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 ZNF768Q9H5H4 540 aaKnown RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 MEAF6Q9HAF1 191 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 TMEM165Q9HC07 324 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 MRPL17Q9NRX2 175 aaKnown RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 PARPBPQ9NWS1 579 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 ANKRD10Q9NXR5 420 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 OR14J1Q9UGF5 321 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 ABT1Q9ULW3 272 aaKnown RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 RNF24Q9Y225 148 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 UNC13AQ9UPW8 1703 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 PFASO15067 1338 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 SPATA31A1Q5TZJ5 1347 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 SPATA31A5Q5VU36 1347 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 SPATA31A7Q8IWB4 1347 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 A0A0U1RQS6 177 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 MAGEB16A2A368 324 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 TMEM247A6NEH6 219 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 GABRR3A8MPY1 467 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 BECN2A8MW95 431 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 SDHDO14521 159 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 KCNJ13O60928 360 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 CDH16O75309 829 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 NEBLO76041 1014 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 CRYGCP07315 174 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 CSN3P07498 182 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 CLTAP09496 248 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 RRASP10301 218 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 UMPSP11172 480 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 TNNI3P19429 210 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 TGM2P21980 687 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 FDFT1P37268 417 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 HAAOP46952 286 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 ME1P48163 572 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 CSNK1EP49674 416 aaKnown RBP3.63□□□□□ -1.83
KTN1-220ENST00000555172 ASCL1P50553 236 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 CCL11P51671 97 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 DLK1P80370 383 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 SIM1P81133 766 aaPredicted RBP3.63□□□□□ -1.83
KTN1-220ENST00000555172 MSLNQ13421 630 aaPredicted RBP3.63□□□□□ -1.83
KTN1-220ENST00000555172 PCID2Q5JVF3 399 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 SPANXN2Q5MJ10 180 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 PRAMEF5Q5TYX0 476 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 PRAMEF6Q5VXH4 476 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 LIPKQ5VXJ0 399 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 CARD17Q5XLA6 110 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 CAPRIN2Q6IMN6 1127 aaKnown RBP3.63□□□□□ -1.83
KTN1-220ENST00000555172 ZSCAN25Q6NSZ9 544 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 ANKRD54Q6NXT1 300 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 TMPRSS11BQ86T26 416 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 CHSY1Q86X52 802 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 ECHDC2Q86YB7 292 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 ERO1BQ86YB8 467 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 ADGRF4Q8IZF3 695 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 GCNT2Q8N0V5 402 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 ZNF611Q8N823 705 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 ZNF596Q8TC21 504 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 FKBP10Q96AY3 582 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 MOB3AQ96BX8 217 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 RHBDF1Q96CC6 855 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 FBXL8Q96CD0 374 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 PGBD1Q96JS3 809 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 HARBI1Q96MB7 349 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 RTP3Q9BQQ7 232 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 TMEM43Q9BTV4 400 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 FICDQ9BVA6 458 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 SF3B5Q9BWJ5 86 aaKnown RBP3.63□□□□□ -1.83
KTN1-220ENST00000555172 TRPV6Q9H1D0 765 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 RAD21L1Q9H4I0 556 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 DCLRE1BQ9H816 532 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 ANKRA2Q9H9E1 313 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 DPP3Q9NY33 737 aa3.63□□□□□ -1.83
KTN1-220ENST00000555172 AHSPQ9NZD4 102 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms