RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 NSMAFQ92636 917 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 HERC2P3Q9BVR0 1158 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 MUC13Q9H3R2 512 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 TMEM185BQ9H7F4 350 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 FBXL12Q9NXK8 326 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 RCOR3Q9P2K3 495 aaPredicted RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PCDHA2Q9Y5H9 948 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 MRPL3P09001 348 aaKnown RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ADH5P11766 374 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ADGRE1Q14246 886 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 RAET1LQ5VY80 246 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ZFPM1Q8IX07 1006 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ANKK1Q8NFD2 765 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 RAB11FIP5Q9BXF6 653 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 FBRSL1Q9HCM7 1045 aaKnown RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ACTR10Q9NZ32 417 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PPP4R1LQ9P1A2 415 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 GPR34Q9UPC5 381 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 NCANO14594 1321 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 BAZ2AQ9UIF9 1905 aaKnown RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CAPN8A6NHC0 703 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 INSIG1O15503 277 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 COQ9O75208 318 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 FARS2O95363 451 aaKnown RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SH3D19Q5HYK7 790 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 IL17RCQ8NAC3 791 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 AENQ8WTP8 325 aaKnown RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PFDN5Q99471 154 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 C11orf84Q9BUA3 381 aaPredicted RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CNTN3Q9P232 1028 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 HMGXB4Q9UGU5 601 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SCN2AQ99250 2005 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 NEMP2A6NFY4 417 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CLN5O75503 358 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SCELO95171 688 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 BPGMP07738 259 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 RBMS1P29558 406 aaKnown RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 E2F1Q01094 437 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 GBE1Q04446 702 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 EEF1A2Q05639 463 aaKnown RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PMS2P3Q13401 168 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CAMK2DQ13557 499 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 TTLL10Q6ZVT0 673 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 OTOP1Q7RTM1 612 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SLC37A3Q8NCC5 494 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 OR10T2Q8NGX3 314 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF442Q9H7R0 627 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 P2RX2Q9UBL9 471 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 hCG_1818297A0A087WSY0 165 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CSNK2A2P19784 350 aaPredicted RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CCNCP24863 283 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PCBP1Q15365 356 aaKnown RBP eCLIP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 TREML2Q5T2D2 321 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CATSPERGQ6ZRH7 1159 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SVOPLQ8N434 492 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 OR4D6Q8NGJ1 314 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 TRIB2Q92519 343 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CAPNS2Q96L46 248 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 HSPA12BQ96MM6 686 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 NEDD4LQ96PU5 975 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SLC22A4Q9H015 551 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 MKLN1Q9UL63 735 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 WNT9AO14904 365 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 EPCAMP16422 314 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 UGT1A1P22309 533 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 RBMXP38159 391 aaKnown RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CLCQ05315 142 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 NOGQ13253 232 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 NTRK2Q16620 822 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF776Q68DI1 518 aaPredicted RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 TMPRSS7Q7RTY8 843 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SLC30A8Q8IWU4 369 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 AVL9Q8NBF6 648 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 NLGN2Q8NFZ4 835 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SHKBP1Q8TBC3 707 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 LRTOMTQ8WZ04 291 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 GIMAP5Q96F15 307 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PTGES2Q9H7Z7 377 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 KCNIP1Q9NZI2 227 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 C5orf60A6NFR6 353 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 GGT3PA6NGU5 568 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ALPIP09923 528 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ANXA3P12429 323 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 RGS6P49758 472 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PSPHP78330 225 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 NUDT13Q86X67 352 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 KREMEN2Q8NCW0 462 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 GCM1Q9NP62 436 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 TAC3Q9UHF0 121 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SERTAD3Q9UJW9 196 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CYP8B1Q9UNU6 501 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 TCAF1Q9Y4C2 921 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ABCC3O15438 1527 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF850A8MQ14 1090 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 AHSA1O95433 338 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 GNAZP19086 355 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CLCNKBP51801 687 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 GNA12Q03113 381 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 MPP7Q5T2T1 576 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms