RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 LHCGRP22888 699 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 SFNP31947 248 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 CDKN2AP42771 156 aaKnown RBP4.94□□□□□ -1.62
PSEN1-211ENST00000554995 CAMLGP49069 296 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 GPC3P51654 580 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 DVL1P1P54792 670 aaPredicted RBP4.94□□□□□ -1.62
PSEN1-211ENST00000554995 LCP2Q13094 533 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 OPCMLQ14982 345 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 GPR33Q49SQ1 333 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.94□□□□□ -1.62
PSEN1-211ENST00000554995 ZCCHC12Q6PEW1 402 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 ISLR2Q6UXK2 745 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 C16orf82Q7Z2V1 217 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 SPATA2LQ8IUW3 424 aaPredicted RBP4.94□□□□□ -1.62
PSEN1-211ENST00000554995 CCDC60Q8IWA6 550 aaPredicted RBP4.94□□□□□ -1.62
PSEN1-211ENST00000554995 PRSS35Q8N3Z0 413 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 SMYD1Q8NB12 490 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 CCNYQ8ND76 341 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 TMEM186Q96B77 213 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 FAM213AQ9BRX8 229 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 TMEM204Q9BSN7 226 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 MTMR12Q9C0I1 747 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 SHARPINQ9H0F6 387 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 CARD9Q9H257 536 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 UPF2Q9HAU5 1272 aaKnown RBP4.94□□□□□ -1.62
PSEN1-211ENST00000554995 INTS10Q9NVR2 710 aaKnown RBP4.94□□□□□ -1.62
PSEN1-211ENST00000554995 FAM118AQ9NWS6 357 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 DONSONQ9NYP3 566 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 UBQLN2Q9UHD9 624 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 TSPAN16Q9UKR8 245 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 R4GN57 208 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 NPHP3Q7Z494 1330 aa4.94□□□□□ -1.62
PSEN1-211ENST00000554995 TMEM129A0AVI4 362 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 ANTXRLA6NF34 631 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 PRAC2D3DTV9 90 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 ZNF197O14709 1029 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 PRKNO60260 465 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-211ENST00000554995 HSF2BPO75031 334 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 CETN2P41208 172 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 CLDN17P56750 224 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 SRP54P61011 504 aaKnown RBP4.93□□□□□ -1.62
PSEN1-211ENST00000554995 RPP38P78345 283 aaKnown RBP4.93□□□□□ -1.62
PSEN1-211ENST00000554995 HTD2P86397 168 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 HNRNPA0Q13151 305 aaKnown RBP4.93□□□□□ -1.62
PSEN1-211ENST00000554995 DMP1Q13316 513 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-211ENST00000554995 TSTA3Q13630 321 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-211ENST00000554995 GAMTQ14353 236 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 SQLEQ14534 574 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 TAF13Q15543 124 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 ZC2HC1CQ53FD0 456 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-211ENST00000554995 ZNF542PQ5EBM4 170 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 SLC25A53Q5H9E4 307 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 C9orf57Q5W0N0 161 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 AWAT2Q6E213 333 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 CAPRIN2Q6IMN6 1127 aaKnown RBP4.93□□□□□ -1.62
PSEN1-211ENST00000554995 NEK5Q6P3R8 708 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 B3GLCTQ6Y288 498 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 CPEB2Q7Z5Q1 589 aaKnown RBP4.93□□□□□ -1.62
PSEN1-211ENST00000554995 ADAMTSL2Q86TH1 951 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 NLRP14Q86W24 1093 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 RCOR2Q8IZ40 523 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 ELMOD2Q8IZ81 293 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 ZNF843Q8N446 348 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 KBTBD3Q8NAB2 608 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 GGHQ92820 318 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 RHNO1Q9BSD3 238 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 ZNF577Q9BSK1 485 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 TMEM245Q9H330 911 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 C5orf66Q9H5L9 145 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 TFB2MQ9H5Q4 396 aaKnown RBP4.93□□□□□ -1.62
PSEN1-211ENST00000554995 EVA1AQ9H8M9 152 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 KCNMB3Q9NPA1 279 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 ZCCHC3Q9NUD5 404 aaKnown RBP4.93□□□□□ -1.62
PSEN1-211ENST00000554995 RNF7Q9UBF6 113 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 CCPG1Q9ULG6 757 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 FAF1Q9UNN5 650 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-211ENST00000554995 KCNJ14Q9UNX9 436 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 TNNQ9UQP3 1299 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 TMED7Q9Y3B3 224 aa4.93□□□□□ -1.62
PSEN1-211ENST00000554995 CKAP5Q14008 2032 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 IGLV9-49A0A0B4J1Y8 123 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 TRBV5-5A0A0J9YX44 114 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 RGSL1A5PLK6 1076 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 C16orf97H3BN30 126 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 FPGTO14772 594 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 ATP6V0E1O15342 81 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 RAF1P04049 648 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 AREGP15514 252 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 CA6P23280 308 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 RPA1P27694 616 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 ALDH4A1P30038 563 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 NR0B1P51843 470 aaKnown RBP4.92□□□□□ -1.62
PSEN1-211ENST00000554995 ART1P52961 327 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 SLC3A1Q07837 685 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 GK2Q14410 553 aaPredicted RBP4.92□□□□□ -1.62
PSEN1-211ENST00000554995 ARMCX4Q5H9R4 360 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 C20orf194Q5TEA3 1177 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.92□□□□□ -1.62
PSEN1-211ENST00000554995 ZNF575Q86XF7 245 aa4.92□□□□□ -1.62
PSEN1-211ENST00000554995 CNPY4Q8N129 248 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms