RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 MDH1P40925 334 aaKnown RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 CCNFP41002 786 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 GLRBP48167 497 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 ARSFP54793 590 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 VSX2P58304 361 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 FASTKQ14296 549 aaKnown RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 GBX1Q14549 363 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 GRM7Q14831 915 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 CTSL3PQ5NE16 218 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 RNF44Q7L0R7 432 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 SRRM1Q8IYB3 904 aaKnown RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 OR4N4Q8N0Y3 316 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 ZADH2Q8N4Q0 377 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 OR11G2Q8NGC1 345 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 OR2A1Q8NGT9 310 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 PPP4R1Q8TF05 950 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 ISL2Q96A47 359 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 ZBTB9Q96C00 473 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 C10orf90Q96M02 699 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 RBBP8Q99708 897 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 MIPEPQ99797 713 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 WDR77Q9BQA1 342 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 SELENOSQ9BQE4 189 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 TRIM56Q9BRZ2 755 aaKnown RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 PPANQ9NQ55 473 aaKnown RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 C20orf96Q9NUD7 363 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 TSR3Q9UJK0 312 aaKnown RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 COPG1Q9Y678 874 aaKnown RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 MAU2Q9Y6X3 613 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 TRIM49D1C9J1S8 452 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 F8W8V4 182 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 TM9SF1O15321 606 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 TYROBPO43914 113 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 ERVK-10P10266 1014 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 RPS3P23396 243 aaKnown RBP eCLIP10.08□□□□□ -0.86e-7■■□□□ 14.4
SHMT2-215ENST00000554656 TTPAP49638 278 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 SNRPNP63162 240 aaKnown RBP10.08□□□□□ -0.8
SHMT2-215ENST00000554656 THOC5Q13769 683 aaKnown RBP10.08□□□□□ -0.8
SHMT2-215ENST00000554656 SF1Q15637 639 aaKnown RBP10.08□□□□□ -0.8
SHMT2-215ENST00000554656 HSP90AA5PQ58FG0 334 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 ZC3H12BQ5HYM0 836 aaKnown RBP10.08□□□□□ -0.8
SHMT2-215ENST00000554656 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.08□□□□□ -0.8
SHMT2-215ENST00000554656 AARS2Q5JTZ9 985 aaKnown RBP10.08□□□□□ -0.8
SHMT2-215ENST00000554656 TCTE1Q5JU00 501 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 WASHC2DQ5SRD0 308 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 PTRHD1Q6GMV3 140 aaKnown RBP10.08□□□□□ -0.8
SHMT2-215ENST00000554656 CNSTQ6PJW8 725 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 CES3Q6UWW8 571 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 PARP9Q8IXQ6 854 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 AMER2Q8N7J2 671 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 OR2L3Q8NG85 312 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 HMGCLL1Q8TB92 370 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 NACC2Q96BF6 587 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 SLC22A18Q96BI1 424 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 CABS1Q96KC9 395 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 BIRC8Q96P09 236 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 TTC1Q99614 292 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 MCMBPQ9BTE3 642 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 TSSK1BQ9BXA7 367 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 RAB11FIP5Q9BXF6 653 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 RHOJQ9H4E5 214 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 CCDC134Q9H6E4 229 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 INTS7Q9NVH2 962 aaKnown RBP10.08□□□□□ -0.8
SHMT2-215ENST00000554656 NKIRAS1Q9NYS0 192 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 GALPQ9UBC7 116 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 GNPTGQ9UJJ9 305 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 SLC39A10Q9ULF5 831 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 CORO1CQ9ULV4 474 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-215ENST00000554656 SLC5A6Q9Y289 635 aa10.08□□□□□ -0.8
SHMT2-215ENST00000554656 IGKV1-8A0A0C4DH67 115 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 A0A0J9YVX5 310 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 TMEM120BA0PK00 339 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 OR2A25A4D2G3 310 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 ARHGEF33A8MVX0 844 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 TARM1B6A8C7 271 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 GOLGA8TH3BQL2 631 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 NIPSNAP2O75323 286 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 KLHL18O94889 574 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 ZWINTO95229 277 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 VAPBO95292 243 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 FKBP9O95302 570 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 F7P08709 466 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-215ENST00000554656 ERGP11308 486 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 CHN1P15882 459 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 OGNP20774 298 aaKnown RBP10.07□□□□□ -0.8
SHMT2-215ENST00000554656 MAGEA12P43365 314 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 TSFMP43897 325 aaKnown RBP10.07□□□□□ -0.8
SHMT2-215ENST00000554656 EFNA3P52797 238 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 GYS2P54840 703 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 KLC1Q07866 573 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 TERF2Q15554 542 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 RBBP7Q16576 425 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 TYSND1Q2T9J0 566 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 PRTGQ2VWP7 1150 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 YOD1Q5VVQ6 348 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-215ENST00000554656 NEPROQ6NW34 567 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 SH2D5Q6ZV89 423 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 LCA5Q86VQ0 697 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 PRSS58Q8IYP2 241 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms