RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 PTGER4P35408 488 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 PTPN9P43378 593 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 RGRP47804 291 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 PAPOLAP51003 745 aaKnown RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 CLCNKAP51800 687 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 GFERP55789 205 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 ART3Q13508 389 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 TUBB3Q13509 450 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 SPARCL1Q14515 664 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 PDCD2Q16342 344 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 CDO1Q16878 200 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 EXOC3L4Q17RC7 722 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 C15orf59Q2T9L4 293 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 C4orf46Q504U0 113 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 RAB6CQ53S08 254 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 C2CD6Q53TS8 623 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 DENND2CQ68D51 928 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 RGS7BPQ6MZT1 257 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 PWWP2BQ6NUJ5 590 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 FAM199XQ6PEV8 388 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 IGFL3Q6UXB1 125 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 TMEM26Q6ZUK4 368 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 PRSS42Q7Z5A4 293 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 HSD11B1LQ7Z5J1 315 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 TECPR1Q7Z6L1 1165 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 CCDC185Q8N715 623 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 EMC1Q8N766 993 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 ATG16L2Q8NAA4 619 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 ST6GALNAC3Q8NDV1 305 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 EXD1Q8NHP7 514 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 DNAJB14Q8TBM8 379 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 NELFBQ8WX92 580 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 ASB10Q8WXI3 467 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 AP2M1Q96CW1 435 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 SCRN2Q96FV2 425 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 TGM7Q96PF1 710 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 OSBPL9Q96SU4 736 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 RUFY1Q96T51 708 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 CINPQ9BW66 212 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 NUDT9Q9BW91 350 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 TRIM5Q9C035 493 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 AMBRA1Q9C0C7 1298 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 RAB6CQ9H0N0 254 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 PCDHAC1Q9H158 963 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 ABCG8Q9H221 673 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 TOR3AQ9H497 397 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 GOLPH3LQ9H4A5 285 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 FAM83DQ9H4H8 585 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 LRRC19Q9H756 370 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 RMI1Q9H9A7 625 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 AKIRIN1Q9H9L7 192 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 GPR83Q9NYM4 423 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 OGFRQ9NZT2 677 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 COPG2Q9UBF2 871 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 EPHA6Q9UF33 1036 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 HOOK1Q9UJC3 728 aaKnown RBP4.73□□□□□ -1.65
ATXN3-228ENST00000554592 SERTAD3Q9UJW9 196 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 DNAJC12Q9UKB3 198 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 RARRES3Q9UL19 164 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 B3GNT3Q9Y2A9 372 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 PCDHGB3Q9Y5G1 929 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 POLQO75417 2590 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 SCN8AQ9UQD0 1980 aa4.73□□□□□ -1.65
ATXN3-228ENST00000554592 MED13Q9UHV7 2174 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 UTP20O75691 2785 aaKnown RBP4.72□□□□□ -1.65
ATXN3-228ENST00000554592 TRGV11A0A075B6L2 103 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 GTPBP10A4D1E9 387 aaKnown RBP4.72□□□□□ -1.65
ATXN3-228ENST00000554592 UNC119BA6NIH7 251 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 AQP12BA6NM10 295 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 RGS10O43665 173 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 KIF1CO43896 1103 aaKnown RBP4.72□□□□□ -1.65
ATXN3-228ENST00000554592 SOCS5O75159 536 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 SOD1P00441 154 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 ALPPP05187 535 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 KLK3P07288 261 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-228ENST00000554592 HSP90AA1P07900 732 aaKnown RBP4.72□□□□□ -1.65
ATXN3-228ENST00000554592 RAB40ALP0C0E4 278 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 KRT3P12035 628 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 EGR1P18146 543 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 CAPN3P20807 821 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 PRKAG1P54619 331 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 AIF1P55008 147 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 HDAC4P56524 1084 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 STX17P56962 302 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 RPS18P62269 152 aaKnown RBP4.72□□□□□ -1.65
ATXN3-228ENST00000554592 UBE2IP63279 158 aaKnown RBP4.72□□□□□ -1.65
ATXN3-228ENST00000554592 ACY1Q03154 408 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 FOXI1Q12951 378 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 LAMB3Q13751 1172 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 E2F2Q14209 437 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 ZNF235Q14590 738 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 MAPKAPK3Q16644 382 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 TMTC4Q5T4D3 741 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 VWA5B1Q5TIE3 1220 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 HECTD2Q5U5R9 776 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 LYPLAL1Q5VWZ2 237 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 ICE2Q659A1 982 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 SFRP4Q6FHJ7 346 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-228ENST00000554592 ISM2Q6H9L7 571 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 KLHL10Q6JEL2 608 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms