RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 C11orf96Q7Z7L8 435 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 PIM3Q86V86 326 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 LRRTM4Q86VH4 590 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 CEP97Q8IW35 865 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 PRSS33Q8NF86 280 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 OR56A4Q8NGH8 313 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 FAM45AQ8TCE6 357 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 TSACCQ96A04 125 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-212ENST00000554486 ARL8AQ96BM9 186 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 FAM136AQ96C01 138 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 MTBPQ96DY7 904 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 CLIP3Q96DZ5 547 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 PDXPQ96GD0 296 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 SH3GL2Q99962 352 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 TMBIM4Q9HC24 238 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 MRPL40Q9NQ50 206 aaKnown RBP6.14□□□□□ -1.43
SCFD1-212ENST00000554486 LANCL2Q9NS86 450 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 TM7SF3Q9NS93 570 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-212ENST00000554486 SLC23A2Q9UGH3 650 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 SLC39A10Q9ULF5 831 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 SUFUQ9UMX1 484 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 CFAP20Q9Y6A4 193 aaKnown RBP6.14□□□□□ -1.43
SCFD1-212ENST00000554486 COMMD10Q9Y6G5 202 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 R4GN57 208 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 ADAMTS9Q9P2N4 1935 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 ATXN2Q99700 1313 aaKnown RBP6.14□□□□□ -1.43
SCFD1-212ENST00000554486 OTOGLQ3ZCN5 2332 aa6.14□□□□□ -1.43
SCFD1-212ENST00000554486 DMDP11532 3685 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 PCDH15Q96QU1 1955 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 IQANK1A0A1B0GTG1 560 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 A0A1B0GTW7 788 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 A0A1B0GVT2 93 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 MGAT4DA6NG13 374 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 GPR89AB7ZAQ6 455 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 TPP1O14773 563 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SCAMP1O15126 338 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 KMOO15229 486 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 RGS16O15492 202 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 PHGDHO43175 533 aaKnown RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 GRID2O43424 1007 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 ATP8B1O43520 1251 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 POP7O75817 140 aaKnown RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SYF2O95926 243 aaKnown RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 FTH1P02794 183 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 C2P06681 752 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 OR56A5P0C7T3 313 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 GPR89BP0CG08 455 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SLC35E2BP0CK96 405 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 DDCP20711 480 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SAT1P21673 171 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 KELP23276 732 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 HTR1BP28222 390 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 PBLDP30039 288 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 GNPDA1P46926 289 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SELENOPP49908 381 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SERPINB8P50452 374 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 NXPH1P58417 271 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SRP54P61011 504 aaKnown RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 RAB10P61026 200 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 DNAJC3Q13217 504 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SP140Q13342 867 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 PTK2BQ14289 1009 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 GBX1Q14549 363 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 ZKSCAN8Q15776 578 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 LPAL2Q16609 132 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 PGS1Q32NB8 556 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 ZNF542PQ5EBM4 170 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 LGSNQ5TDP6 509 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 ZNF585AQ6P3V2 769 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 NAPRTQ6XQN6 538 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 FAM83HQ6ZRV2 1179 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 TRABD2AQ86V40 505 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 TRAPPC5Q8IUR0 188 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SYT12Q8IV01 421 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 WDR75Q8IWA0 830 aaKnown RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SIDT2Q8NBJ9 832 aaKnown RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 OR2L2Q8NH16 312 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 CD200R1Q8TD46 325 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 ANKRD49Q8WVL7 239 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 PIGKQ92643 395 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 KCNJ9Q92806 393 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 TLCD1Q96CP7 247 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 PGM2Q96G03 612 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 ZNF514Q96K75 400 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 LINC00615Q96LM1 132 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 OR2M4Q96R27 311 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 RUFY1Q96T51 708 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 GPR21Q99679 349 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 CCM2Q9BSQ5 444 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 CCDC68Q9H2F9 335 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 TCEAL2Q9H3H9 227 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 MANSC1Q9H8J5 431 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 RMI1Q9H9A7 625 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SARS2Q9NP81 518 aaKnown RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SNX15Q9NRS6 342 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 SPATS2LQ9NUQ6 558 aaKnown RBP6.13□□□□□ -1.43
SCFD1-212ENST00000554486 TAS2R13Q9NYV9 303 aa6.13□□□□□ -1.43
SCFD1-212ENST00000554486 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms