RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 BAK1Q16611 211 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 CDONQ4KMG0 1287 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 GPR153Q6NV75 609 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 RGMBQ6NW40 437 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 ULK4Q96C45 1275 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 TTPALQ9BTX7 342 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 GON7Q9BXV9 100 aa16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 MBD1Q9UIS9 605 aaPredicted RBP16.39■□□□□ 0.21
PPP4R3A-202ENST00000554390 MEN1O00255 615 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 STSP08842 583 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 CAMK2GQ13555 558 aaPredicted RBP16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 ARHGEF6Q15052 776 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 TAB1Q15750 504 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 RFLNAQ6ZTI6 216 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 MRPL10Q7Z7H8 261 aaKnown RBP16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 FLCNQ8NFG4 579 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 MGME1Q9BQP7 344 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 ULK1O75385 1050 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 RHOCP08134 193 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 DDX39BQ13838 428 aaKnown RBP16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 SPRYD7Q5W111 196 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 DOK6Q6PKX4 331 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 SERPINA9Q86WD7 417 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 PLPP6Q8IY26 295 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 TTC9Q92623 222 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 VPS35Q96QK1 796 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 PSKH2Q96QS6 385 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 TLR8Q9NR97 1041 aaKnown RBP16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 GPR83Q9NYM4 423 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 KCNN3Q9UGI6 736 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 NINQ8N4C6 2090 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 MICAL3Q7RTP6 2002 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 TRBV5-3A0A0A0MS03 114 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 DRGXA6NNA5 263 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 POLR1CO15160 346 aaPredicted RBP16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 ZNF780AO75290 641 aaPredicted RBP16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 PRAMEF1O95521 474 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 VLDLRP98155 873 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 MGAT3Q09327 533 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 TRIM60Q495X7 471 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 OR4F3Q6IEY1 312 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 DNAJC22Q8N4W6 341 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 MCCC1Q96RQ3 725 aaPredicted RBP16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 SAMD4AQ9UPU9 718 aaKnown RBP16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 CFL2Q9Y281 166 aa16.38■□□□□ 0.21
PPP4R3A-202ENST00000554390 OR6C70A6NIJ9 312 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 CLCA1A8K7I4 914 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 CDK2AP1O14519 115 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 IL6P05231 212 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 BCKDHAP12694 445 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 M6PRP20645 277 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 RPS5P46782 204 aaKnown RBP16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 TTPAP49638 278 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 DAB2P98082 770 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 MADCAM1Q13477 382 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 GLB1LQ6UWU2 654 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 TPD52L3Q96J77 140 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 KCNC2Q96PR1 638 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 CPPED1Q9BRF8 314 aaPredicted RBP16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 ATP13A2Q9NQ11 1180 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 SPASTQ9UBP0 616 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 FKBP9O95302 570 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 VNN2O95498 520 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 HOXB6P17509 224 aaKnown RBP16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 HOXC8P31273 242 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 FBXO43Q4G163 708 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 FAAH2Q6GMR7 532 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 SYCE2Q6PIF2 218 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 CARNMT1Q8N4J0 409 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 HRASLS5Q96KN8 279 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 PPP3R2Q96LZ3 170 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 ASB8Q9H765 288 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 PCDHB8Q9UN66 801 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 AP3M1Q9Y2T2 418 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 CCL27Q9Y4X3 112 aa16.37■□□□□ 0.21
PPP4R3A-202ENST00000554390 MTX2O75431 263 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 CLDN7O95471 211 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 FABP3P05413 133 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 COL6A1P12109 1028 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 ARF5P84085 180 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 RTP2Q5QGT7 225 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 GRAMD2AQ8IUY3 354 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 CACTIN-AS1Q8N1I8 211 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 LMNTD1Q8N9Z9 388 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 GLB1L3Q8NCI6 653 aaPredicted RBP16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 APOLD1Q96LR9 279 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 FAM193BQ96PV7 902 aaPredicted RBP16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 BBS2Q9BXC9 721 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 LRTM1Q9HBL6 345 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 SMURF1Q9HCE7 757 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 TIGARQ9NQ88 270 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 DYRK4Q9NR20 520 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 THUMPD1Q9NXG2 353 aaKnown RBP16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 ARIH1Q9Y4X5 557 aaPredicted RBP16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 CASP8AP2Q9UKL3 1982 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 MYCP01106 439 aaPredicted RBP16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 NUDT7P0C024 238 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 TRIM48Q8IWZ4 208 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 STX19Q8N4C7 294 aa16.36■□□□□ 0.21
PPP4R3A-202ENST00000554390 WFDC5Q8TCV5 224 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms