RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 MAGEA4P43358 317 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 RPS15AP62244 130 aaKnown RBP12.45□□□□□ -0.42
SHMT2-211ENST00000554310 ZNF460Q14592 562 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 TNFAIP8L3Q5GJ75 292 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 PRICKLE2Q7Z3G6 844 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 CEP97Q8IW35 865 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 METTL27Q8N6F8 245 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-211ENST00000554310 OR56A3Q8NH54 315 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 THAP11Q96EK4 314 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 PRAP1Q96NZ9 151 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 SPSB2Q99619 263 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 GPR22Q99680 433 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 CENPHQ9H3R5 247 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 SYNPO2LQ9H987 977 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 ZNF304Q9HCX3 659 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 ZNF71Q9NQZ8 489 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-211ENST00000554310 NINJ2Q9NZG7 142 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 CTSFQ9UBX1 484 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 ANAPC2Q9UJX6 822 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 G3BP2Q9UN86 482 aaKnown RBP12.45□□□□□ -0.42
SHMT2-211ENST00000554310 CDC14AQ9UNH5 594 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 NBASA2RRP1 2371 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 PCSK5Q92824 1860 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 PEX12O00623 359 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 SUV39H1O43463 412 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 CEACAM4O75871 244 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 MED26O95402 600 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 GUCA1CO95843 209 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 UMODP07911 640 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 ATXN8OSP0DMR3 200 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 FBLP22087 321 aaKnown RBP12.44□□□□□ -0.42
SHMT2-211ENST00000554310 GRK3P35626 688 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 OR1D4P47884 311 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 PGDP52209 483 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 PPP2R2AP63151 447 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 GNGT1P63211 74 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 CSNK1G2P78368 415 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 CDKL1Q00532 357 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 CHAF1BQ13112 559 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 DSG2Q14126 1118 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 USP10Q14694 798 aaKnown RBP12.44□□□□□ -0.42
SHMT2-211ENST00000554310 NKG7Q16617 165 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 HKDC1Q2TB90 917 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 ATG14Q6ZNE5 492 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 FRA10AC1Q70Z53 315 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 PPP1R32Q7Z5V6 425 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 PLD3Q8IV08 490 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 CTAGE3PQ8IX95 158 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 ABHD11Q8NFV4 315 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-211ENST00000554310 COL26A1Q96A83 441 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 FER1L6-AS2Q96M78 137 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 SLC25A23Q9BV35 468 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 DERL2Q9GZP9 239 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 DRC3Q9H069 523 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 CNOT10Q9H9A5 744 aaKnown RBP12.44□□□□□ -0.42
SHMT2-211ENST00000554310 LRRC4CQ9HCJ2 640 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 CTNNAL1Q9UBT7 734 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 IKZF3Q9UKT9 509 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 SH2B3Q9UQQ2 575 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 MTO1Q9Y2Z2 717 aaKnown RBP12.44□□□□□ -0.42
SHMT2-211ENST00000554310 OARD1Q9Y530 152 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 TENM4Q6N022 2769 aa12.44□□□□□ -0.42
SHMT2-211ENST00000554310 IGLV3-12A0A075B6K2 115 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 VSTM2BA6NLU5 285 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 J3QKU1 62 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 CDC7O00311 574 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 RGS16O15492 202 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-211ENST00000554310 P2RX6O15547 441 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 WISP3O95389 354 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-211ENST00000554310 ANXA5P08758 320 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 CDH1P12830 882 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 NPPBP16860 134 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 STMN1P16949 149 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 MMP11P24347 488 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 SPRP35270 261 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-211ENST00000554310 MDH1P40925 334 aaKnown RBP12.43□□□□□ -0.42
SHMT2-211ENST00000554310 HNMTP50135 292 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 CCR8P51685 355 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 OCA2Q04671 838 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 FAM53BQ14153 422 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 ZKSCAN8Q15776 578 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-211ENST00000554310 NDUFA9Q16795 377 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 ZXDCQ2QGD7 858 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-211ENST00000554310 KBTBD12Q3ZCT8 623 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 DCAF10Q5QP82 559 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 UBAP2Q5T6F2 1119 aaKnown RBP12.43□□□□□ -0.42
SHMT2-211ENST00000554310 GRTP1Q5TC63 336 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 ASB18Q6ZVZ8 466 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 VN1R4Q7Z5H5 301 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 PTRH1Q86Y79 214 aaKnown RBP12.43□□□□□ -0.42
SHMT2-211ENST00000554310 ARHGEF39Q8N4T4 335 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 DTWD1Q8N5C7 304 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 PPM1NQ8N819 430 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 CLEC1AQ8NC01 280 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 FBF1Q8TES7 1133 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 ANKRD49Q8WVL7 239 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 ALKBH8Q96BT7 664 aaKnown RBP12.43□□□□□ -0.42
SHMT2-211ENST00000554310 PYCR2Q96C36 320 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 VPS50Q96JG6 964 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms