RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 BTRCQ9Y297 605 aa10.45□□□□□ -0.74
PABPN1-203ENST00000553960 MAN2B2Q9Y2E5 1009 aa10.45□□□□□ -0.74
PABPN1-203ENST00000553960 AP3M1Q9Y2T2 418 aa10.45□□□□□ -0.74
PABPN1-203ENST00000553960 TDRKHQ9Y2W6 561 aaKnown RBP10.45□□□□□ -0.74
PABPN1-203ENST00000553960 CACNA1HO95180 2353 aa10.45□□□□□ -0.74
PABPN1-203ENST00000553960 GOLGA4Q13439 2230 aaKnown RBP10.45□□□□□ -0.74
PABPN1-203ENST00000553960 TDRD6O60522 2096 aaKnown RBP10.45□□□□□ -0.74
PABPN1-203ENST00000553960 A0A1B0GTQ1 180 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 KRT87PA6NCN2 255 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 OR5K3A6NET4 321 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 MAGEB17A8MXT2 336 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 FFAR3O14843 346 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 TOX3O15405 576 aaPredicted RBP10.44□□□□□ -0.74
PABPN1-203ENST00000553960 GPR42O15529 346 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 PCDHGA12O60330 932 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 SEC22BO75396 215 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 CDH1P12830 882 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 VARSP26640 1264 aaKnown RBP10.44□□□□□ -0.74
PABPN1-203ENST00000553960 AVPR2P30518 371 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 GRIA3P42263 894 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 BNC1Q01954 994 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 HHEXQ03014 270 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 SRSF11Q05519 484 aaKnown RBP10.44□□□□□ -0.74
PABPN1-203ENST00000553960 ACSM2AQ08AH3 577 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 PDE7AQ13946 482 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 TLR1Q15399 786 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 SHBQ15464 509 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 FXNQ16595 210 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 IMPG1Q17R60 797 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 C14orf28Q4W4Y0 310 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 IL23RQ5VWK5 629 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 ACSM2BQ68CK6 577 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 NOXRED1Q6NXP6 359 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 DUS1LQ6P1R4 473 aaKnown RBP10.44□□□□□ -0.74
PABPN1-203ENST00000553960 PRMT9Q6P2P2 845 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 SUSD1Q6UWL2 747 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 DBX2Q6ZNG2 339 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 MED25Q71SY5 747 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 RD3Q7Z3Z2 195 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 ARL14Q8N4G2 192 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 DCBLD1Q8N8Z6 715 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 MFSD9Q8NBP5 474 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 RBM15BQ8NDT2 890 aaKnown RBP10.44□□□□□ -0.74
PABPN1-203ENST00000553960 FAM46DQ8NEK8 389 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 NT5CQ8TCD5 201 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 SNX19Q92543 992 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 ZNF285Q96NJ3 590 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 HOPXQ9BPY8 73 aaPredicted RBP10.44□□□□□ -0.74
PABPN1-203ENST00000553960 GPATCH1Q9BRR8 931 aaKnown RBP10.44□□□□□ -0.74
PABPN1-203ENST00000553960 DDX31Q9H8H2 851 aaKnown RBP10.44□□□□□ -0.74
PABPN1-203ENST00000553960 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.44□□□□□ -0.74
PABPN1-203ENST00000553960 NLGN3Q9NZ94 848 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 SH2B3Q9UQQ2 575 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 RRP15Q9Y3B9 282 aaKnown RBP10.44□□□□□ -0.74
PABPN1-203ENST00000553960 PCDHGB2Q9Y5G2 931 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 PCDHGA4Q9Y5G9 962 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 PTGDR2Q9Y5Y4 395 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 CFAP20Q9Y6A4 193 aaKnown RBP10.44□□□□□ -0.74
PABPN1-203ENST00000553960 KMT2EQ8IZD2 1858 aa10.44□□□□□ -0.74
PABPN1-203ENST00000553960 C15orf38-AP3S2A0A0A6YYH1 394 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 ANKDD1BA6NHY2 528 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 B2RBV5 119 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 BTN3A3O00478 584 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 GYG2O15488 501 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 CFLARO15519 480 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 MYO1DO94832 1006 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 ANXA6P08133 673 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 SP9P0CG40 484 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 SMIM10L1P0DMW3 83 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 NQO1P15559 274 aaKnown RBP10.43□□□□□ -0.74
PABPN1-203ENST00000553960 GLB1P16278 677 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 DDX5P17844 614 aaKnown RBP10.43□□□□□ -0.74
PABPN1-203ENST00000553960 TIA1P31483 386 aaKnown RBP eCLIP10.43□□□□□ -0.74
PABPN1-203ENST00000553960 CSNK1EP49674 416 aaKnown RBP10.43□□□□□ -0.74
PABPN1-203ENST00000553960 GPLD1P80108 840 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 CSTF1Q05048 431 aaKnown RBP10.43□□□□□ -0.74
PABPN1-203ENST00000553960 RPS6KA2Q15349 733 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 THEMIS2Q5TEJ8 643 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 KHDRBS2Q5VWX1 349 aaKnown RBP10.43□□□□□ -0.74
PABPN1-203ENST00000553960 NIPAL1Q6NVV3 410 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 SPESP1Q6UW49 350 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 C16orf89Q6UX73 402 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 RNF44Q7L0R7 432 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 PAGE2Q7Z2X7 111 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 ARPINQ7Z6K5 226 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 OOSP2Q86WS3 158 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 TRIM48Q8IWZ4 208 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 ZCCHC7Q8N3Z6 543 aaKnown RBP10.43□□□□□ -0.74
PABPN1-203ENST00000553960 SLC25A45Q8N413 288 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 ARL10Q8N8L6 244 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 ANKRD53Q8N9V6 530 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 BAHD1Q8TBE0 780 aaPredicted RBP10.43□□□□□ -0.74
PABPN1-203ENST00000553960 COQ8BQ96D53 544 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 SMIM10Q96HG1 83 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 NECAB3Q96P71 396 aaPredicted RBP10.43□□□□□ -0.74
PABPN1-203ENST00000553960 DPYSL5Q9BPU6 564 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 CENPKQ9BS16 269 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 DPH7Q9BTV6 452 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 ZNF717Q9BY31 904 aaPredicted RBP10.43□□□□□ -0.74
PABPN1-203ENST00000553960 CADM1Q9BY67 442 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms