RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 PCDHGA5Q9Y5G8 931 aa13.18□□□□□ -0.3
APEX1-205ENST00000553555 KLK4Q9Y5K2 254 aa13.18□□□□□ -0.3
APEX1-205ENST00000553555 RNF215Q9Y6U7 377 aa13.18□□□□□ -0.3
APEX1-205ENST00000553555 NUDT21O43809 227 aaKnown RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 NRP2O60462 931 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 CER1O95813 267 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 TGFB1P01137 390 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 PROS1P07225 676 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 ESRRAP11474 423 aaPredicted RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 CD1EP15812 388 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 PTX3P26022 381 aaPredicted RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 MPLP40238 635 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 LSSP48449 732 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 CCT8P50990 548 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 EPHA4P54764 986 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 RPS6KA2Q15349 733 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 PDCD4Q53EL6 469 aaKnown RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 FCRL6Q6DN72 434 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 ZCCHC8Q6NZY4 707 aaKnown RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 PAOXQ6QHF9 649 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 ZNF438Q7Z4V0 828 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 MIER2Q8N344 545 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 OR4C6Q8NH72 309 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 CMTM5Q96DZ9 223 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 FCRL1Q96LA6 429 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 SERPINI1Q99574 410 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 ABCG4Q9H172 646 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 PRM3Q9NNZ6 103 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 TXLNGQ9NUQ3 528 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 ANKMY1Q9P2S6 941 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 RAB23Q9ULC3 237 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 EIF3LQ9Y262 564 aaKnown RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 TMED5Q9Y3A6 229 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 POLR3HQ9Y535 204 aaPredicted RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 CROCCQ5TZA2 2017 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 A0A0J9YY10 115 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 LOC100653049A0A140TA62 436 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 OR2A25A4D2G3 310 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 TRIM38O00635 465 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 ZW10O43264 779 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 SH3BGRLO75368 114 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 KRT34O76011 436 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 UNC5CO95185 931 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 TBX6O95947 436 aaPredicted RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 ALPPL2P10696 532 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 G6PDP11413 515 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 COX4I1P13073 169 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 GLB1P16278 677 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 MAGP20916 626 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 CALB2P22676 271 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 AHRP35869 848 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 BCL6P41182 706 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 ACADVLP49748 655 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 PPP1CAP62136 330 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 TBL3Q12788 808 aaKnown RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 HERC3Q15034 1050 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 AGKQ53H12 422 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 FBXO42Q6P3S6 717 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 ZC3H14Q6PJT7 736 aaKnown RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 TBC1D19Q8N5T2 526 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 POU5F2Q8N7G0 328 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 MFSD9Q8NBP5 474 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 TTLQ8NG68 377 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 OR2I1PQ8NGU4 316 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 RP9Q8TA86 221 aaKnown RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 CREB3L4Q8TEY5 395 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 CHTF18Q8WVB6 975 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 C11orf24Q96F05 449 aaPredicted RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 PPM1MQ96MI6 270 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 OR51B5Q9H339 312 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 SMOC1Q9H4F8 434 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 EVA1BQ9NVM1 165 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 GMEB2Q9UKD1 530 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 POMT2Q9UKY4 750 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 PADI4Q9UM07 663 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 RRP15Q9Y3B9 282 aaKnown RBP13.17□□□□□ -0.3
APEX1-205ENST00000553555 AP1M2Q9Y6Q5 423 aa13.17□□□□□ -0.3
APEX1-205ENST00000553555 CLEC3AO75596 197 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 THRAP10827 490 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 PRPS2P11908 318 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 BCKDHAP12694 445 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 ACPPP15309 386 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 GSTM2P28161 218 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 MAPK1P28482 360 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 GPR3P46089 330 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 CAPZBP47756 277 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 NME5P56597 212 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 UFM1P61960 85 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 CYP4F2P78329 520 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 RELAQ04206 551 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 CUL3Q13618 768 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 ZIC1Q15915 447 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 CCDC6Q16204 474 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 PLA2G2CQ5R387 149 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 DEPDC1Q5TB30 811 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 CACHD1Q5VU97 1274 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 NOXRED1Q6NXP6 359 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 CYP20A1Q6UW02 462 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 FUNDC1Q8IVP5 155 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 LIX1Q8N485 282 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms