RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 EPS8L3Q8TE67 593 aaKnown RBP13.1□□□□□ -0.31
TROAP-213ENST00000550709 SLC13A3Q8WWT9 602 aa13.1□□□□□ -0.31
TROAP-213ENST00000550709 THAP11Q96EK4 314 aa13.1□□□□□ -0.31
TROAP-213ENST00000550709 DPH2Q9BQC3 489 aaPredicted RBP13.1□□□□□ -0.31
TROAP-213ENST00000550709 AIF1LQ9BQI0 150 aa13.1□□□□□ -0.31
TROAP-213ENST00000550709 GPR87Q9BY21 358 aa13.1□□□□□ -0.31
TROAP-213ENST00000550709 NLNQ9BYT8 704 aa13.1□□□□□ -0.31
TROAP-213ENST00000550709 CD244Q9BZW8 370 aa13.1□□□□□ -0.31
TROAP-213ENST00000550709 PELI2Q9HAT8 420 aa13.1□□□□□ -0.31
TROAP-213ENST00000550709 PRM3Q9NNZ6 103 aa13.1□□□□□ -0.31
TROAP-213ENST00000550709 XPR1Q9UBH6 696 aa13.1□□□□□ -0.31
TROAP-213ENST00000550709 FETUBQ9UGM5 382 aa13.1□□□□□ -0.31
TROAP-213ENST00000550709 KCNE1BA0A087WTH5 132 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 A0A1W2PPM1 405 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 TRBC2A0A5B9 178 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 CDC14CA4D256 554 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 LRRC14BA6NHZ5 514 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 TXNDC9O14530 226 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 CLGNO14967 610 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 RBP1P09455 135 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 C1GALT1C1LP0DN25 315 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 COL6A2P12110 1019 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 SNRPNP63162 240 aaKnown RBP13.09□□□□□ -0.31
TROAP-213ENST00000550709 REEP5Q00765 189 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 MC1RQ01726 317 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 IFFO1Q0D2I5 559 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 SLBPQ14493 270 aaKnown RBP eCLIP13.09□□□□□ -0.31
TROAP-213ENST00000550709 TSNAXIP1Q2TAA8 658 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 XKR6Q5GH73 641 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 ASPGQ86U10 573 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 CYP4X1Q8N118 509 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 CAMKVQ8NCB2 501 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 ZCCHC10Q8TBK6 192 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 CAVIN3Q969G5 261 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 COL26A1Q96A83 441 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 PHF21BQ96EK2 531 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 YIPF2Q9BWQ6 316 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 SLC22A11Q9NSA0 550 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 GEMIN8Q9NWZ8 242 aaKnown RBP13.09□□□□□ -0.31
TROAP-213ENST00000550709 OPTCQ9UBM4 332 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 MRPS2Q9Y399 296 aaKnown RBP13.09□□□□□ -0.31
TROAP-213ENST00000550709 ANGPTL3Q9Y5C1 460 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 PCDHGA6Q9Y5G7 932 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 ZFHX4Q86UP3 3567 aa13.09□□□□□ -0.31
TROAP-213ENST00000550709 MGAQ8IWI9 3026 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 ADAMTS20P59510 1910 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 A0A0A6YYC8 382 aaPredicted RBP13.08□□□□□ -0.32
TROAP-213ENST00000550709 I3L1I5 382 aaPredicted RBP13.08□□□□□ -0.32
TROAP-213ENST00000550709 TK2O00142 265 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 FFAR3O14843 346 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 GPR42O15529 346 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 NDUFS4O43181 175 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 PRAMEF4O60810 478 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 SNRNP200O75643 2136 aaKnown RBP13.08□□□□□ -0.32
TROAP-213ENST00000550709 SIX3O95343 332 aaPredicted RBP13.08□□□□□ -0.32
TROAP-213ENST00000550709 FURINP09958 794 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 RAB40ALP0C0E4 278 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 KRT15P19012 456 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 HNF4AP41235 474 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 SCTRP47872 440 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 ALDH18A1P54886 795 aaKnown RBP13.08□□□□□ -0.32
TROAP-213ENST00000550709 CDC20Q12834 499 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 NDUFA9Q16795 377 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 DEFB109BQ30KR1 87 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 PRAMEF9Q5VWM5 478 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 ATG9BQ674R7 924 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 SHISA6Q6ZSJ9 500 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 LRRC70Q7Z2Q7 622 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 TMEM151BQ8IW70 566 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 PRSS58Q8IYP2 241 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 TEX9Q8N6V9 391 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 PTGR2Q8N8N7 351 aaPredicted RBP13.08□□□□□ -0.32
TROAP-213ENST00000550709 KCT2Q8NC54 265 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 UBTD2Q8WUN7 234 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 SNRNP27Q8WVK2 155 aaKnown RBP13.08□□□□□ -0.32
TROAP-213ENST00000550709 EXTL1Q92935 676 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 MOCOSQ96EN8 888 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 MMABQ96EY8 250 aaPredicted RBP13.08□□□□□ -0.32
TROAP-213ENST00000550709 C17orf62Q9BQA9 187 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 MRPL57Q9BQC6 102 aaKnown RBP13.08□□□□□ -0.32
TROAP-213ENST00000550709 CAPS2Q9BXY5 557 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 DRC3Q9H069 523 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 ZNF304Q9HCX3 659 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 ENAMQ9NRM1 1142 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 GPRC5BQ9NZH0 403 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 CTSFQ9UBX1 484 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 TCFL5Q9UL49 500 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 PTRH2Q9Y3E5 179 aaKnown RBP13.08□□□□□ -0.32
TROAP-213ENST00000550709 SEC16AO15027 2179 aa13.08□□□□□ -0.32
TROAP-213ENST00000550709 LOC400499M0QZD8 3231 aa13.07□□□□□ -0.32
TROAP-213ENST00000550709 CCDC189A1A4V9 331 aa13.07□□□□□ -0.32
TROAP-213ENST00000550709 K7EPI3 171 aa13.07□□□□□ -0.32
TROAP-213ENST00000550709 CNOT3O75175 753 aaKnown RBP13.07□□□□□ -0.32
TROAP-213ENST00000550709 SMIM24O75264 130 aa13.07□□□□□ -0.32
TROAP-213ENST00000550709 PIM1P11309 404 aaPredicted RBP13.07□□□□□ -0.32
TROAP-213ENST00000550709 EPORP19235 508 aa13.07□□□□□ -0.32
TROAP-213ENST00000550709 FBLP22087 321 aaKnown RBP13.07□□□□□ -0.32
TROAP-213ENST00000550709 IRF8Q02556 426 aa13.07□□□□□ -0.32
TROAP-213ENST00000550709 CHIT1Q13231 466 aa13.07□□□□□ -0.32
TROAP-213ENST00000550709 IL10RAQ13651 578 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms