RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 AVILO75366 819 aa21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 CELA2AP08217 269 aa21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 ESRRAP11474 423 aaPredicted RBP21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 MAT1AQ00266 395 aaKnown RBP21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 CUL1Q13616 776 aa21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 TRIP13Q15645 432 aaPredicted RBP21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 ZNF766Q5HY98 468 aa21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 PLAG1Q6DJT9 500 aa21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 OR9A4Q8NGU2 314 aa21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 OR51Q1Q8NH59 317 aa21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 UNKQ9C0B0 810 aaKnown RBP21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 VN1R1Q9GZP7 353 aa21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 XAB2Q9HCS7 855 aaKnown RBP21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 LZTFL1Q9NQ48 299 aa21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 PCDHGB6Q9Y5F9 930 aa21.83■■□□□ 1.09
SMARCD1-209ENST00000550477 TCRBV7S3A2A0A539 114 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 IL10P22301 178 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 SKIV2L2P42285 1042 aaKnown RBP21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 CA7P43166 264 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 VPS41P49754 854 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 ACTN3Q08043 901 aaPredicted RBP21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 EXT1Q16394 746 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 MEP1AQ16819 746 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 XKRXQ6PP77 449 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 PLD3Q8IV08 490 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 ARHGEF39Q8N4T4 335 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 HORMAD2Q8N7B1 307 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 TRIM58Q8NG06 486 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 ITLN2Q8WWU7 325 aaPredicted RBP21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 CCDC138Q96M89 665 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 KCNK13Q9HB14 408 aa21.82■■□□□ 1.08
SMARCD1-209ENST00000550477 CPAMD8Q8IZJ3 1885 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 PABPN1LA6NDY0 278 aaKnown RBP21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 P2RX6O15547 441 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 SEC24DO94855 1032 aaPredicted RBP21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 KRT14P02533 472 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 CCND1P24385 295 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 PTGER4P35408 488 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 BCL6P41182 706 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 MAGEA6P43360 314 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 XCR1P46094 333 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 RGS4P49798 205 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 SMSP52788 366 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 CTBP1Q13363 440 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 KRTCAP3Q53RY4 240 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 BNC2Q6ZN30 1099 aaPredicted RBP21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 FAM98AQ8NCA5 519 aaKnown RBP21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 CCDC120Q96HB5 630 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 GPR21Q99679 349 aa21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 UTP23Q9BRU9 249 aaKnown RBP21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 FBXO6Q9NRD1 293 aaPredicted RBP21.81■■□□□ 1.08
SMARCD1-209ENST00000550477 CCDC175P0C221 793 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 MST1P26927 711 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 HTR1EP28566 365 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 IMPA1P29218 277 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 TAS2R50P59544 299 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 SKP1P63208 163 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 ACER2Q5QJU3 275 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 CYHR1Q6ZMK1 362 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 GDF7Q7Z4P5 450 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 C17orf64Q86WR6 236 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 MCUQ8NE86 351 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 M1APQ8TC57 530 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 SLC30A3Q99726 388 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 SYNPO2LQ9H987 977 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 C20orf96Q9NUD7 363 aaPredicted RBP21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 SH3BGRL2Q9UJC5 107 aa21.8■■□□□ 1.08
SMARCD1-209ENST00000550477 C8GP07360 202 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 HIST1H2AGP0C0S8 130 aaPredicted RBP21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 PRF1P14222 555 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 COX6B1P14854 86 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 CD46P15529 392 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 HIST1H2ADP20671 130 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 ZNF662Q6ZS27 426 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 PCGF5Q86SE9 256 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 CAND1Q86VP6 1230 aaKnown RBP21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 DENND6AQ8IWF6 608 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 LRRC56Q8IYG6 542 aaPredicted RBP21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 TBC1D19Q8N5T2 526 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 SLC5A8Q8N695 610 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 TMEM178AQ8NBL3 297 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 MAGED4Q96JG8 741 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 HIST1H2AHQ96KK5 128 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 LPAR4Q99677 370 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 HIST1H2AJQ99878 128 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 H2AFJQ9BTM1 129 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 TRMT6Q9UJA5 497 aaKnown RBP21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 MAD1L1Q9Y6D9 718 aa21.79■■□□□ 1.08
SMARCD1-209ENST00000550477 IGHV3-20A0A0C4DH32 117 aa21.78■■□□□ 1.08
SMARCD1-209ENST00000550477 CDK2AP1O14519 115 aa21.78■■□□□ 1.08
SMARCD1-209ENST00000550477 SLC19A2O60779 497 aa21.78■■□□□ 1.08
SMARCD1-209ENST00000550477 SLC35G6P0C7Q6 338 aa21.78■■□□□ 1.08
SMARCD1-209ENST00000550477 IL1RNP18510 177 aa21.78■■□□□ 1.08
SMARCD1-209ENST00000550477 EEF1DP29692 281 aaKnown RBP21.78■■□□□ 1.08
SMARCD1-209ENST00000550477 TBPL1P62380 186 aa21.78■■□□□ 1.08
SMARCD1-209ENST00000550477 ALDH6A1Q02252 535 aaKnown RBP21.78■■□□□ 1.08
SMARCD1-209ENST00000550477 ZXDCQ2QGD7 858 aaPredicted RBP21.78■■□□□ 1.08
SMARCD1-209ENST00000550477 TMEM214Q6NUQ4 689 aaKnown RBP21.78■■□□□ 1.08
SMARCD1-209ENST00000550477 NIPAL1Q6NVV3 410 aa21.78■■□□□ 1.08
SMARCD1-209ENST00000550477 H3F3CQ6NXT2 135 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms