RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 MRPL46Q9H2W6 279 aaKnown RBP18.47■□□□□ 0.55
DDX54-207ENST00000550016 ROPN1Q9HAT0 212 aaPredicted RBP18.47■□□□□ 0.55
DDX54-207ENST00000550016 XPR1Q9UBH6 696 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 OPTCQ9UBM4 332 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 NDOR1Q9UHB4 597 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 IL17BQ9UHF5 180 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 RUVBL1Q9Y265 456 aaKnown RBP18.47■□□□□ 0.55
DDX54-207ENST00000550016 ASB1Q9Y576 335 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 PCDHGA6Q9Y5G7 932 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 A0A1B0GX78 115 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 K7EPI3 171 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 SMIM24O75264 130 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 KATNA1O75449 491 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 RAB40ALP0C0E4 278 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 CXCR2P25025 360 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 RPS15P62841 145 aaKnown RBP18.46■□□□□ 0.55
DDX54-207ENST00000550016 CXADRP78310 365 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 REEP5Q00765 189 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 COL9A2Q14055 689 aaPredicted RBP18.46■□□□□ 0.55
DDX54-207ENST00000550016 MUM1Q2TAK8 710 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 HKDC1Q2TB90 917 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 NKAIN1Q4KMZ8 207 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 GARNL3Q5VVW2 1013 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 VN1R4Q7Z5H5 301 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 CAMKVQ8NCB2 501 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 SNRNP27Q8WVK2 155 aaKnown RBP18.46■□□□□ 0.55
DDX54-207ENST00000550016 TM4SF19Q96DZ7 209 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 C17orf62Q9BQA9 187 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 EHD1Q9H4M9 534 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 PRORYQ9H606 182 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 DCDC2Q9UHG0 476 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 PLAAQ9Y263 795 aa18.46■□□□□ 0.55
DDX54-207ENST00000550016 FARSAQ9Y285 508 aaKnown RBP18.46■□□□□ 0.55
DDX54-207ENST00000550016 TNPO3Q9Y5L0 923 aaKnown RBP18.46■□□□□ 0.55
DDX54-207ENST00000550016 FOXO6A8MYZ6 492 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 C9J4A7 227 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 P2RX6O15547 441 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 ONECUT2O95948 504 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 CAPN1P07384 714 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 PIM1P11309 404 aaPredicted RBP18.45■□□□□ 0.54
DDX54-207ENST00000550016 VARSP26640 1264 aaKnown RBP18.45■□□□□ 0.54
DDX54-207ENST00000550016 PTPN4P29074 926 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 AHRP35869 848 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 SCTRP47872 440 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 PCBP2Q15366 365 aaKnown RBP eCLIP18.45■□□□□ 0.54
DDX54-207ENST00000550016 ARHGAP40Q5TG30 622 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 METTL2BQ6P1Q9 378 aaKnown RBP18.45■□□□□ 0.54
DDX54-207ENST00000550016 SH2D5Q6ZV89 423 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 ASPGQ86U10 573 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 TMEM151AQ8N4L1 468 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 SLC13A3Q8WWT9 602 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 CRELD1Q96HD1 420 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 C10orf90Q96M02 699 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 TMEM109Q9BVC6 243 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 SPNS1Q9H2V7 528 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 TMEM216Q9P0N5 145 aa18.45■□□□□ 0.54
DDX54-207ENST00000550016 ZNF891A8MT65 544 aaPredicted RBP18.44■□□□□ 0.54
DDX54-207ENST00000550016 TK2O00142 265 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 MED26O95402 600 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 STATHP02808 62 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 EPB42P16452 691 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 EPORP19235 508 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 MC1RQ01726 317 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 RBBP5Q15291 538 aaKnown RBP18.44■□□□□ 0.54
DDX54-207ENST00000550016 NDUFA9Q16795 377 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 XKR6Q5GH73 641 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 PRMT9Q6P2P2 845 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 FAM198BQ6UWH4 519 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 KRT78Q8N1N4 520 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 ARHGEF39Q8N4T4 335 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 TEX9Q8N6V9 391 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 PTGR2Q8N8N7 351 aaPredicted RBP18.44■□□□□ 0.54
DDX54-207ENST00000550016 PHF21BQ96EK2 531 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 WDR34Q96EX3 536 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 PTCD3Q96EY7 689 aaKnown RBP18.44■□□□□ 0.54
DDX54-207ENST00000550016 PITHD1Q9GZP4 211 aaPredicted RBP18.44■□□□□ 0.54
DDX54-207ENST00000550016 NT5DC2Q9H857 520 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 RRAGDQ9NQL2 400 aaPredicted RBP18.44■□□□□ 0.54
DDX54-207ENST00000550016 GEMIN8Q9NWZ8 242 aaKnown RBP18.44■□□□□ 0.54
DDX54-207ENST00000550016 IFT80Q9P2H3 777 aaPredicted RBP18.44■□□□□ 0.54
DDX54-207ENST00000550016 LGALS13Q9UHV8 139 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 GPN3Q9UHW5 284 aaPredicted RBP18.44■□□□□ 0.54
DDX54-207ENST00000550016 ZFP69BQ9UJL9 534 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 CDC14AQ9UNH5 594 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 ANGPTL3Q9Y5C1 460 aa18.44■□□□□ 0.54
DDX54-207ENST00000550016 MRPS18BQ9Y676 258 aaKnown RBP18.44■□□□□ 0.54
DDX54-207ENST00000550016 LRRC14BA6NHZ5 514 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 STX16-NPEPL1H3BU86 382 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 STX16O14662 325 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 PRAMEF4O60810 478 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 ERLIN1O75477 346 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 CD63P08962 238 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 SBK3P0C264 359 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 SLC35G6P0C7Q6 338 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 TAC1P20366 129 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 ITGAXP20702 1163 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 CASP2P42575 452 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 IRF8Q02556 426 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 PCDH1Q08174 1060 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 LAPTM5Q13571 262 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms