RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ZBTB20Q9HC78 741 aaPredicted RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 EXOSC4Q9NPD3 245 aaKnown RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 ZIM2Q9NZV7 527 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 PDP1Q9P0J1 537 aaPredicted RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 SLC25A13Q9UJS0 675 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 C3orf18Q9UK00 162 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 PRKAB1Q9Y478 270 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 PCDHB1Q9Y5F3 818 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 A0A0G2JN53 185 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 NEDD8-MDP1E9PL57 170 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 IFRD1O00458 451 aaPredicted RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 AQP9O43315 295 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 CNOT3O75175 753 aaKnown RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 NME6O75414 186 aaPredicted RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 APOL3O95236 402 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 CISD3P0C7P0 127 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 PRR35P0CG20 571 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 NR4A2P43354 598 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 LY6G5CQ5SRR4 150 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 MSRB3Q8IXL7 192 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 CELF5Q8N6W0 485 aaKnown RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 OR4K1Q8NGD4 311 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 HDAC2Q92769 488 aaKnown RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 MRGPRX3Q96LB0 322 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 RBM4BQ9BQ04 359 aaKnown RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 RBM4Q9BWF3 364 aaKnown RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 C1QTNF3Q9BXJ4 246 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 SUV39H2Q9H5I1 410 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 ENPP5Q9UJA9 477 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 EIF3LQ9Y262 564 aaKnown RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 PMF1-BGLAPU3KQ54 211 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 ARID1AO14497 2285 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 A0A096LPI6 279 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 TSPAN11A1L157 253 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 PSMD11O00231 422 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 FAM20BO75063 409 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 JRKO75564 520 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 C21orf33P30042 268 aaPredicted RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 S100A3P33764 101 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 RPIAP49247 311 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 PPP2R2BQ00005 443 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 GPM6BQ13491 265 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 GANABQ14697 944 aaKnown RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 ZNF697Q5TEC3 545 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 TMEM215Q68D42 235 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 TPRG1Q6ZUI0 275 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 SNX20Q7Z614 316 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 P2RY8Q86VZ1 359 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 ZNF548Q8NEK5 533 aaPredicted RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 FAR1Q8WVX9 515 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 CAPSLQ8WWF8 208 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 PROX1Q92786 737 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 TUBA1CQ9BQE3 449 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 GPN2Q9H9Y4 310 aaPredicted RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 LRTM1Q9HBL6 345 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 IL26Q9NPH9 171 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 ACSL6Q9UKU0 697 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 GMPPBQ9Y5P6 360 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 REV3LO60673 3130 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.72□□□□□ -0.69
LINC00661-204ENST00000549354 GNG14A0A1W2PPG7 69 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 RFXANKO14593 260 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 HOXC11O43248 304 aaPredicted RBP10.72□□□□□ -0.69
LINC00661-204ENST00000549354 TULP3O75386 442 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 CA3P07451 260 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 PREPP48147 710 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 PCYT1AP49585 367 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 PHC1P78364 1004 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 OXA1LQ15070 435 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 KCNJ8Q15842 424 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 DUSP6Q16828 381 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 GPR33Q49SQ1 333 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 RBM48Q5RL73 367 aaKnown RBP10.72□□□□□ -0.69
LINC00661-204ENST00000549354 CRTC1Q6UUV9 634 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 OLIG3Q7RTU3 272 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 B3GNT8Q7Z7M8 397 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 ZDHHC21Q8IVQ6 265 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 POC5Q8NA72 575 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 APIPQ96GX9 242 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 REXO5Q96IC2 774 aaKnown RBP10.72□□□□□ -0.69
LINC00661-204ENST00000549354 LRRC3BQ96PB8 259 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 LMAN2LQ9H0V9 348 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 ZNF639Q9UID6 485 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 SAMHD1Q9Y3Z3 626 aaKnown RBP10.72□□□□□ -0.69
LINC00661-204ENST00000549354 GPC6Q9Y625 555 aaPredicted RBP10.72□□□□□ -0.69
LINC00661-204ENST00000549354 UGT2B11O75310 529 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 BPIP17213 487 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 AZGP1P25311 298 aaKnown RBP10.72□□□□□ -0.69
LINC00661-204ENST00000549354 CLCN7P51798 805 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 MVKQ03426 396 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 FAM109BQ6ICB4 259 aaPredicted RBP10.72□□□□□ -0.69
LINC00661-204ENST00000549354 HORMAD1Q86X24 394 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 VRK3Q8IV63 474 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 ADHFE1Q8IWW8 467 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 HCAR2Q8TDS4 363 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 RHBDF1Q96CC6 855 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 ASPSCR1Q9BZE9 553 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 ERVW-1Q9UQF0 538 aa10.72□□□□□ -0.69
LINC00661-204ENST00000549354 PRR23AA6NEV1 266 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 GRXCR1A8MXD5 290 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms