RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 HTATIP2Q9BUP3 242 aa11.96□□□□□ -0.49
SLC38A1-206ENST00000549049 KLF16Q9BXK1 252 aaPredicted RBP11.96□□□□□ -0.49
SLC38A1-206ENST00000549049 MAGIXQ9H6Y5 334 aa11.96□□□□□ -0.49
SLC38A1-206ENST00000549049 DUSP12Q9UNI6 340 aa11.96□□□□□ -0.49
SLC38A1-206ENST00000549049 ZNF232Q9UNY5 417 aa11.96□□□□□ -0.49
SLC38A1-206ENST00000549049 YIPF1Q9Y548 306 aa11.96□□□□□ -0.49
SLC38A1-206ENST00000549049 DICER1Q9UPY3 1922 aaKnown RBP11.96□□□□□ -0.49
SLC38A1-206ENST00000549049 TMEM88BA6NKF7 163 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 GABRR3A8MPY1 467 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 M0QX08 132 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 SH3BP5O60239 455 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 OR56A5P0C7T3 313 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 ITGAMP11215 1152 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 PABPC1P11940 636 aaKnown RBP11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 CD22P20273 847 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 SERPINA4P29622 427 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 FEN1P39748 380 aaKnown RBP11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 BDKRB1P46663 353 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 PRIM2P49643 509 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 GAB1Q13480 694 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 LRIF1Q5T3J3 769 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 OR8H2Q8N162 312 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 RHOXF1Q8NHV9 184 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 APH1BQ8WW43 257 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 ITPAQ9BY32 194 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 SGK2Q9HBY8 427 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 NECTIN3Q9NQS3 549 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 ABCB8Q9NUT2 735 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 ERVK13-1Q9NX77 482 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 QPCTLQ9NXS2 382 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 CFAP97Q9P2B7 532 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 PCDHGA6Q9Y5G7 932 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 CHD5Q8TDI0 1954 aa11.96□□□□□ -0.5
SLC38A1-206ENST00000549049 PTHP01270 115 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 PAX3P23760 479 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 S100A5P33763 92 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 AP1S1P61966 158 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 FKBP1BP68106 108 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 DOC2AQ14183 400 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 VEPH1Q14D04 833 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 C5orf22Q49AR2 442 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 ARMCX4Q5H9R4 360 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 ZNF362Q5T0B9 420 aaPredicted RBP11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 TPRG1LQ5T0D9 272 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 CPTPQ5TA50 214 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 Q6ZVL8 140 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 CHST9Q7L1S5 443 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 GATAD2AQ86YP4 633 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 CHST14Q8NCH0 376 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 ST13P5Q8NFI4 369 aaPredicted RBP11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 OR4A15Q8NGL6 344 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 CMTM7Q96FZ5 175 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 CLSTN3Q9BQT9 956 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 BRD9Q9H8M2 597 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 VPS29Q9UBQ0 182 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 RAB23Q9ULC3 237 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 NDRG4Q9ULP0 352 aaKnown RBP11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 CASP8AP2Q9UKL3 1982 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 M0R082 166 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 CTDSP2O14595 271 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 IGSF6O95976 241 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 CTSKP43235 329 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 RAB15P59190 212 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 ST3GAL4Q11206 333 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 SMARCB1Q12824 385 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 STARD3Q14849 445 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 INO80DQ53TQ3 878 aaPredicted RBP11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 DESI1Q6ICB0 168 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 CAPN13Q6MZZ7 669 aaPredicted RBP11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 Q6ZVU0 165 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 SZRD1Q7Z422 152 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 ZNF605Q86T29 641 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 TSPYL5Q86VY4 417 aaPredicted RBP11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 CELF2-AS1Q8N7Q2 184 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 ZNF513Q8N8E2 541 aaPredicted RBP11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 HJURPQ8NCD3 748 aaPredicted RBP11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 OR10G2Q8NGC3 310 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 SORCS1Q8WY21 1168 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 SLC38A4Q969I6 547 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 SAMD11Q96NU1 681 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 ACAT2Q9BWD1 397 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 ZNF334Q9HCZ1 680 aaPredicted RBP11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 ZDHHC3Q9NYG2 299 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 B4GALT6Q9UBX8 382 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 ABT1Q9ULW3 272 aaKnown RBP11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 UNC80Q8N2C7 3258 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 OR2A25A4D2G3 310 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 TGFB1P01137 390 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 C9P02748 559 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 SLC10A3P09131 477 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 CKMT1AP12532 417 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 PRPS1L1P21108 318 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 TCEA1P23193 301 aaKnown RBP11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 MAPK1P28482 360 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 TGFBR2P37173 567 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 WNT3P56703 355 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 PTSQ03393 145 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 MACC1Q6ZN28 852 aa11.95□□□□□ -0.5
SLC38A1-206ENST00000549049 DPY19L3Q6ZPD9 716 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms