RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 DEFB109BQ30KR1 87 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 BCL7AQ4VC05 210 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 KHDC1Q4VXA5 237 aaKnown RBP19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 TMEM198Q66K66 360 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 GTF2H2CQ6P1K8 395 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 HEATR4Q86WZ0 1026 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 CFAP61Q8NHU2 1237 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 CXorf40AQ8TE69 158 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 DLG3Q92796 817 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 KIAA1143Q96AT1 154 aaPredicted RBP19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 WRAP53Q9BUR4 548 aaKnown RBP19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 ASPSCR1Q9BZE9 553 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 GPN2Q9H9Y4 310 aaPredicted RBP19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 PARVBQ9HBI1 364 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 PRDM8Q9NQV8 689 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 NDE1Q9NXR1 346 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 ZNF225Q9UK10 706 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 CNOT6Q9ULM6 557 aaKnown RBP19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 DGKBQ9Y6T7 804 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 IGHV5-10-1A0A0J9YXX1 117 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 PIP5K1BO14986 540 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 CRCPO75575 148 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 SOD1P00441 154 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 PRR35P0CG20 571 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 ELAVL4P26378 380 aaKnown RBP19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 HNMTP50135 292 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 FOXA1P55317 472 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 AGERQ15109 404 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 XKR7Q5GH72 579 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 GOLGA7Q7Z5G4 137 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 TAF8Q7Z7C8 310 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 POU5F2Q8N7G0 328 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 RASGEF1AQ8N9B8 481 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 FBXO27Q8NI29 283 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 NAT14Q8WUY8 206 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 ELMO1Q92556 727 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 ZNF514Q96K75 400 aaPredicted RBP19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 EGFL8Q99944 293 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 TMEM79Q9BSE2 394 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 CCM2Q9BSQ5 444 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 APOOQ9BUR5 198 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 NTMT1Q9BV86 223 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 TUBB1Q9H4B7 451 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 ASB1Q9Y576 335 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 ARHGEF17Q96PE2 2063 aaPredicted RBP19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 ESPL1Q14674 2120 aa19.23■□□□□ 0.67
CTDSP2-204ENST00000548823 EFCAB7A8K855 629 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 K7EPI3 171 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 SEMA7AO75326 666 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 RNF224P0DH78 156 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 LBPP18428 481 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 CYP2A7P20853 494 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 DCTP40126 519 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 MC1RQ01726 317 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 HSPA14Q0VDF9 509 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 TRA2AQ13595 282 aaKnown RBP eCLIP19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 AMZ1Q400G9 498 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 TCTN3Q6NUS6 607 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 UBE2R2Q712K3 238 aaPredicted RBP19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 DET1Q7L5Y6 550 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 SPATA19Q7Z5L4 167 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 SFTPA2Q8IWL1 248 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 SCUBE1Q8IWY4 988 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 EFCAB3Q8N7B9 438 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 AGBL5Q8NDL9 886 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 CCDC74BQ96LY2 380 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 C3orf30Q96M34 536 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 PHF12Q96QT6 1004 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 NUDT22Q9BRQ3 303 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 NOL11Q9H8H0 719 aaKnown RBP19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 AKTIPQ9H8T0 292 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 TMEM45AQ9NWC5 275 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 WWOXQ9NZC7 414 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 OPTCQ9UBM4 332 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 BAIAP2L1Q9UHR4 511 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 PILRAQ9UKJ1 303 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 PDE10AQ9Y233 779 aa19.22■□□□□ 0.67
CTDSP2-204ENST00000548823 LOC100653049A0A140TA62 436 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 SLC5A10A0PJK1 596 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 OR7A17O14581 309 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 ZW10O43264 779 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 KRT34O76011 436 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 WDR47O94967 919 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 OR4F21O95013 312 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 MATN4O95460 622 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 DDAH2O95865 285 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 HIST1H2AGP0C0S8 130 aaPredicted RBP19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 HIST1H2ADP20671 130 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 TEAD1P28347 426 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 TRAF3Q13114 568 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 GSTA3Q16772 222 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 CRTC2Q53ET0 693 aaPredicted RBP19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 LRRC70Q7Z2Q7 622 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 SNX32Q86XE0 403 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 MCOLN3Q8TDD5 553 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 HIST1H2AHQ96KK5 128 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 LINC00615Q96LM1 132 aaPredicted RBP19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 WDR92Q96MX6 357 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 KCNA7Q96RP8 456 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 HIST1H2AJQ99878 128 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms