RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 LURAP1LQ8IV03 231 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 CNTN4Q8IWV2 1026 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 SLC35F6Q8N357 371 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 OR1N1Q8NGS0 311 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 EEF1AKMT1Q8WVE0 214 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 IMMP1LQ96LU5 166 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 VN1R1Q9GZP7 353 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 OLAHQ9NV23 265 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 PLA2G3Q9NZ20 509 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 DYTNA2CJ06 578 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 C8GP07360 202 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 CYC1P08574 325 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 C8orf89P0DMQ9 161 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 ITGAMP11215 1152 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 IL1RNP18510 177 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 BCL6P41182 706 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 RGS4P49798 205 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 TDGF1P3P51864 188 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 CDKN2DP55273 166 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 DHX9Q08211 1270 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 PPP1R7Q15435 360 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 INAQ16352 499 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 MSS51Q4VC12 460 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 UGT3A1Q6NUS8 523 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 AGTRAPQ6RW13 159 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 LANCL3Q6ZV70 420 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 BCORP1Q8N888 145 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 MCOLN3Q8TDD5 553 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 CCDC138Q96M89 665 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 TAAR6Q96RI8 345 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 MACROD1Q9BQ69 325 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 SGPP1Q9BX95 441 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 PCBD2Q9H0N5 130 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 PLAC1Q9HBJ0 212 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 TAS2R13Q9NYV9 303 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 SLC17A6Q9P2U8 582 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 OSGIN2Q9Y236 505 aa16.46■□□□□ 0.23
CHMP1A-205ENST00000548650 CRYBG3Q68DQ2 2970 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 TRAV17A0A0B4J275 112 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 DNALI1O14645 258 aaPredicted RBP16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 TSPAN12O95859 305 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 F10P00742 488 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 SPANXN3Q5MJ09 141 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 HIBCHQ6NVY1 386 aaPredicted RBP16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 PAQR3Q6TCH7 311 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 C17orf64Q86WR6 236 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 PDSS2Q86YH6 399 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 MYO1HQ8N1T3 1032 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 ZCCHC10Q8TBK6 192 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 HAS2Q92819 552 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 SLCO2A1Q92959 643 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 TM4SF19Q96DZ7 209 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 THAP11Q96EK4 314 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 LINGO1Q96FE5 620 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 MAGEB10Q96LZ2 347 aaPredicted RBP16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 TUBB6Q9BUF5 446 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 RNF32Q9H0A6 362 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 ATG10Q9H0Y0 220 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 PARVBQ9HBI1 364 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 HCN3Q9P1Z3 774 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 ASIC3Q9UHC3 531 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 SNX12Q9UMY4 172 aa16.45■□□□□ 0.22
CHMP1A-205ENST00000548650 CELSR2Q9HCU4 2923 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 FEZF1A0PJY2 475 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 CES2O00748 559 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 SLC16A5O15375 505 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 LRRTM2O43300 516 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 WFS1O76024 890 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 SEC24DO94855 1032 aaPredicted RBP16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 TTC4O95801 387 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 WDPCPO95876 746 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 UQCRHP07919 91 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 CDH1P12830 882 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 CCND1P24385 295 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 XCR1P46094 333 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 AP2B1P63010 937 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 ZXDCQ2QGD7 858 aaPredicted RBP16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 MINDY4Q4G0A6 757 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 LCTLQ6UWM7 567 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 KIAA0408Q6ZU52 694 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 GALNT7Q86SF2 657 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 ASPGQ86U10 573 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 IGDCC3Q8IVU1 814 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 KCT2Q8NC54 265 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 CAMKVQ8NCB2 501 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 NR4A3Q92570 626 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 CERS2Q96G23 380 aa16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 WDR83Q9BRX9 315 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 DDX47Q9H0S4 455 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-205ENST00000548650 IGHV3-20A0A0C4DH32 117 aa16.43■□□□□ 0.22
CHMP1A-205ENST00000548650 SGK494L7N484 410 aa16.43■□□□□ 0.22
CHMP1A-205ENST00000548650 RDH16O75452 317 aa16.43■□□□□ 0.22
CHMP1A-205ENST00000548650 AHSGP02765 367 aa16.43■□□□□ 0.22
CHMP1A-205ENST00000548650 STSP08842 583 aa16.43■□□□□ 0.22
CHMP1A-205ENST00000548650 NAE1Q13564 534 aa16.43■□□□□ 0.22
CHMP1A-205ENST00000548650 OR51Q1Q8NH59 317 aa16.43■□□□□ 0.22
CHMP1A-205ENST00000548650 GABPB2Q8TAK5 448 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-205ENST00000548650 METTL21AQ8WXB1 218 aa16.43■□□□□ 0.22
CHMP1A-205ENST00000548650 NAT9Q9BTE0 207 aa16.43■□□□□ 0.22
CHMP1A-205ENST00000548650 OR5H15A6NDH6 313 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms