RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 P2RX6O15547 441 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 FOXS1O43638 330 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 JRKO75564 520 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 TTC4O95801 387 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 F10P00742 488 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 AHSGP02765 367 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 HIST1H2AGP0C0S8 130 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 PRR35P0CG20 571 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 HIST1H2ADP20671 130 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 GABRB3P28472 473 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 IMPA1P29218 277 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 SKIV2L2P42285 1042 aaKnown RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 AVPR1BP47901 424 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 RGS4P49798 205 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 RNF144AP50876 292 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 PGGT1BP53609 377 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 TBPL1P62380 186 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 SNRPNP63162 240 aaKnown RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 ARG2P78540 354 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 MAT1AQ00266 395 aaKnown RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 TIAL1Q01085 375 aaKnown RBP eCLIP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 RELAQ04206 551 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 NAE1Q13564 534 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 CRYMQ14894 314 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 ZNF169Q14929 603 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 TLR1Q15399 786 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 NDUFA9Q16795 377 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 SPANXN3Q5MJ09 141 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 RBM20Q5T481 1227 aaKnown RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 MFSD4BQ5TF39 518 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 GARNL3Q5VVW2 1013 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 AGTRAPQ6RW13 159 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 IGFL2Q6UWQ7 119 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 MBOAT1Q6ZNC8 495 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 PCGF5Q86SE9 256 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 IGDCC3Q8IVU1 814 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 KLHL7Q8IXQ5 586 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 LRRC56Q8IYG6 542 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 MYO1HQ8N1T3 1032 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 SIRT6Q8N6T7 355 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 AMER3Q8N944 861 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 GPATCH11Q8N954 259 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 C2CD4AQ8NCU7 369 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 OR9A4Q8NGU2 314 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 GABPB2Q8TAK5 448 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 BRIX1Q8TDN6 353 aaKnown RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 GRHL3Q8TE85 626 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 PPP4R1Q8TF05 950 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 MVB12AQ96EY5 273 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 CFAP36Q96G28 342 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 HIST1H2AHQ96KK5 128 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 CAPZA3Q96KX2 299 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 MAGEB10Q96LZ2 347 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 PWWP2AQ96N64 755 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 HIST1H2AJQ99878 128 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 H2AFJQ9BTM1 129 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 DRC3Q9H069 523 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 PARVBQ9HBI1 364 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 MKKSQ9NPJ1 570 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 CCDC177Q9NQR7 707 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 TAS2R13Q9NYV9 303 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 SLC17A6Q9P2U8 582 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 ERRFI1Q9UJM3 462 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 SH2B3Q9UQQ2 575 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 PDE10AQ9Y233 779 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 MRPS2Q9Y399 296 aaKnown RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 PCSK5Q92824 1860 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 ZNF106Q9H2Y7 1883 aaKnown RBP6.36□□□□□ -1.39
SCAF11-211ENST00000547950 COL12A1Q99715 3063 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 NBASA2RRP1 2371 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 MAST4O15021 2626 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 KCNE1BA0A087WTH5 132 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 IGHV1-45A0A0A0MS14 117 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 IGHV3-20A0A0C4DH32 117 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 DYTNA2CJ06 578 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 PABPN1LA6NDY0 278 aaKnown RBP6.35□□□□□ -1.39
SCAF11-211ENST00000547950 A8MUI8 341 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 SGK494L7N484 410 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 EIF3FO00303 357 aaPredicted RBP6.35□□□□□ -1.39
SCAF11-211ENST00000547950 CES2O00748 559 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 SLC16A5O15375 505 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 LCMT2O60294 686 aaKnown RBP6.35□□□□□ -1.39
SCAF11-211ENST00000547950 GUCA1CO95843 209 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 DDAH2O95865 285 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 SERPINA7P05543 415 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 C8GP07360 202 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 CELA2AP08217 269 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 C8orf89P0DMQ9 161 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 COX6A1P12074 109 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 CDH1P12830 882 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 NPPBP16860 134 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 SAT1P21673 171 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 HRH2P25021 359 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 COL8A1P27658 744 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 ELK3P41970 407 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 IL2P60568 153 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 GNG11P61952 73 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 RPS15AP62244 130 aaKnown RBP6.35□□□□□ -1.39
SCAF11-211ENST00000547950 CSNK1G2P78368 415 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 MEF2AQ02078 507 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms