RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 CPZQ66K79 652 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 TMEM214Q6NUQ4 689 aaKnown RBP11.29□□□□□ -0.6
YBX3-217ENST00000546164 TCTN3Q6NUS6 607 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 NXPE4Q6UWF7 544 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 RAPH1Q70E73 1250 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 MED25Q71SY5 747 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 PPP1R32Q7Z5V6 425 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 TBC1D1Q86TI0 1168 aaPredicted RBP11.29□□□□□ -0.6
YBX3-217ENST00000546164 ASPGQ86U10 573 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 ISCA2Q86U28 154 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 METTL27Q8N6F8 245 aaPredicted RBP11.29□□□□□ -0.6
YBX3-217ENST00000546164 EFCAB3Q8N7B9 438 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 PDPRQ8NCN5 879 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 STAG3L4Q8TBR4 150 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 SLC44A1Q8WWI5 657 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 ISL2Q96A47 359 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 COL26A1Q96A83 441 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 TRIM55Q9BYV6 548 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 UNKQ9C0B0 810 aaKnown RBP11.29□□□□□ -0.6
YBX3-217ENST00000546164 ING2Q9H160 280 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 NMRAL1Q9HBL8 299 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 MLXIPLQ9NP71 852 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 IGSF5Q9NSI5 407 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 ZNF282Q9UDV7 671 aaPredicted RBP11.29□□□□□ -0.6
YBX3-217ENST00000546164 TLK1Q9UKI8 766 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 NFU1Q9UMS0 254 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 SLC22A14Q9Y267 594 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 ACOT9Q9Y305 439 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 DYRK1BQ9Y463 629 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 PCDHGA9Q9Y5G4 932 aaKnown RBP11.29□□□□□ -0.6
YBX3-217ENST00000546164 MAU2Q9Y6X3 613 aa11.29□□□□□ -0.6
YBX3-217ENST00000546164 A0A087X1B8 175 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 FEZF1A0PJY2 475 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 H0YIG0 161 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 TAPBPO15533 448 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 NSA2O95478 260 aaKnown RBP11.28□□□□□ -0.6
YBX3-217ENST00000546164 ALDOAP04075 364 aaKnown RBP11.28□□□□□ -0.6
YBX3-217ENST00000546164 C2P06681 752 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 ABHD2P08910 425 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 LTA4HP09960 611 aaKnown RBP11.28□□□□□ -0.6
YBX3-217ENST00000546164 SLC35G6P0C7Q6 338 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 FBLP22087 321 aaKnown RBP11.28□□□□□ -0.6
YBX3-217ENST00000546164 OTX2P32243 289 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 AHRP35869 848 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 MAGEA12P43365 314 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 SCTRP47872 440 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 SERPINB8P50452 374 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 FOXL2P58012 376 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 REEP5Q00765 189 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 OCA2Q04671 838 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 DLG1Q12959 904 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 PWP1Q13610 501 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 ATP1A4Q13733 1029 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 BMPR2Q13873 1038 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 MROH9Q5TGP6 573 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 SULT1C3Q6IMI6 304 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 TMEM151BQ8IW70 566 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 CENPLQ8N0S6 344 aaPredicted RBP11.28□□□□□ -0.6
YBX3-217ENST00000546164 TBC1D19Q8N5T2 526 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 AMER3Q8N944 861 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 EIF1ADQ8N9N8 165 aaKnown RBP11.28□□□□□ -0.6
YBX3-217ENST00000546164 RHEBL1Q8TAI7 183 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 STT3BQ8TCJ2 826 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 SLC13A3Q8WWT9 602 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 FER1L6-AS2Q96M78 137 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 ATOH8Q96SQ7 321 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 AIF1LQ9BQI0 150 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 TMEM79Q9BSE2 394 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 CAPS2Q9BXY5 557 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 TGIF2Q9GZN2 237 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 CNOT10Q9H9A5 744 aaKnown RBP11.28□□□□□ -0.6
YBX3-217ENST00000546164 ACSS2Q9NR19 701 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 SNX15Q9NRS6 342 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 SEMA3GQ9NS98 782 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 P4HTMQ9NXG6 502 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 GPRC5BQ9NZH0 403 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 COPG2Q9UBF2 871 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 ZFP69BQ9UJL9 534 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 ZNF180Q9UJW8 692 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 MRPS2Q9Y399 296 aaKnown RBP11.28□□□□□ -0.6
YBX3-217ENST00000546164 BOLA1Q9Y3E2 137 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 MAP4K5Q9Y4K4 846 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 SLC22A7Q9Y694 548 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 MED13Q9UHV7 2174 aa11.28□□□□□ -0.6
YBX3-217ENST00000546164 GCN1Q92616 2671 aaKnown RBP11.27□□□□□ -0.6
YBX3-217ENST00000546164 A0A087WUV0 522 aaPredicted RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 A0A0A6YYC8 382 aaPredicted RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 I3L1I5 382 aaPredicted RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 PEX12O00623 359 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 KERAO60938 352 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 DNAJB5O75953 348 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 WDR47O94967 919 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 INHBAP08476 426 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 ZGLP1P0C6A0 271 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 GNAZP19086 355 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 TFEBP19484 476 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 CNTFP26441 200 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 GMPRP36959 345 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 GDF5P43026 501 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 AVPR1BP47901 424 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms