RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TAF10Q12962 218 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 MTAPQ13126 283 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 PPIGQ13427 754 aaKnown RBP eCLIP13.73□□□□□ -0.216e-7■□□□□ 10.2
SRP54-202ENST00000546080 NFE2Q16621 373 aaPredicted RBP13.73□□□□□ -0.21
SRP54-202ENST00000546080 SPRYD7Q5W111 196 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 ERAP2Q6P179 960 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 KRT73Q86Y46 540 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 SYNPOQ8N3V7 929 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 SLC5A8Q8N695 610 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 CLDN19Q8N6F1 224 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 B3GNT7Q8NFL0 401 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 SPPL2AQ8TCT8 520 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 OR5M11Q96RB7 305 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 EBPLQ9BY08 206 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 MS4A12Q9NXJ0 267 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 PADI2Q9Y2J8 665 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 PRSS21Q9Y6M0 314 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 TDRD15B5MCY1 1934 aaKnown RBP13.73□□□□□ -0.21
SRP54-202ENST00000546080 TFECO14948 347 aaPredicted RBP13.72□□□□□ -0.21
SRP54-202ENST00000546080 PRAMEF1O95521 474 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 ANXA5P08758 320 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 GABRB1P18505 474 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 PRPS1L1P21108 318 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 AQP1P29972 269 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 SLC6A4P31645 630 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 RPS5P46782 204 aaKnown RBP13.72□□□□□ -0.21
SRP54-202ENST00000546080 GALK2Q01415 458 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 SLAMF1Q13291 335 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 NOXA1Q86UR1 476 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 SYT12Q8IV01 421 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 TTC9BQ8N6N2 239 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 GPR151Q8TDV0 419 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 HHIPQ96QV1 700 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 BBS2Q9BXC9 721 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 SLC32A1Q9H598 525 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 RDH14Q9HBH5 336 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 TMEM184CQ9NVA4 438 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 KLHL20Q9Y2M5 609 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 GREB1Q4ZG55 1949 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 LINC00854A0A1B0GVQ3 168 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 M0R129 80 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 DDNO94850 711 aaPredicted RBP13.72□□□□□ -0.21
SRP54-202ENST00000546080 RHOCP08134 193 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 ANXA8P13928 327 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 COX7A2P14406 83 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 PCSK2P16519 638 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 AMD1P17707 334 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 EPORP19235 508 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 CYP2A7P20853 494 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 PRPH2P23942 346 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 AZGP1P25311 298 aaKnown RBP13.72□□□□□ -0.21
SRP54-202ENST00000546080 CDH4P55283 916 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 SRSF11Q05519 484 aaKnown RBP13.72□□□□□ -0.21
SRP54-202ENST00000546080 TRIM60Q495X7 471 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 SMUG1Q53HV7 270 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 ZMAT1Q5H9K5 638 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 NOXRED1Q6NXP6 359 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 TMPRSS11AQ6ZMR5 421 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 GPR155Q7Z3F1 870 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 ZNF438Q7Z4V0 828 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 ATCAYQ86WG3 371 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 RNF130Q86XS8 419 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 CLECL1Q8IZS7 167 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 CSGALNACT1Q8TDX6 532 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 JPH3Q8WXH2 748 aaPredicted RBP13.72□□□□□ -0.21
SRP54-202ENST00000546080 MCCC1Q96RQ3 725 aaPredicted RBP13.72□□□□□ -0.21
SRP54-202ENST00000546080 CNPPD1Q9BV87 410 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 CCSER2Q9H7U1 834 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 EXOSC4Q9NPD3 245 aaKnown RBP13.72□□□□□ -0.21
SRP54-202ENST00000546080 RPRD1BQ9NQG5 326 aaKnown RBP13.72□□□□□ -0.21
SRP54-202ENST00000546080 ASAH2Q9NR71 780 aa13.72□□□□□ -0.21
SRP54-202ENST00000546080 ZNF623O75123 536 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 RPS24P62847 133 aaKnown RBP13.71□□□□□ -0.21
SRP54-202ENST00000546080 SPIBQ01892 262 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 BAK1Q16611 211 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 UGT8Q16880 541 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 TRAF7Q6Q0C0 670 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 C19orf48Q6RUI8 117 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 LGI4Q8N135 537 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 OR52J3Q8NH60 311 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 CDC26Q8NHZ8 85 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 WDR36Q8NI36 951 aaKnown RBP13.71□□□□□ -0.21
SRP54-202ENST00000546080 ASB15Q8WXK1 588 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 GDF15Q99988 308 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 NIPSNAP1Q9BPW8 284 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 DOHHQ9BU89 302 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 ASPNQ9BXN1 380 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 IRF2BPLQ9H1B7 796 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 ASB8Q9H765 288 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 TPT1P8Q9HAU6 139 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 RLIMQ9NVW2 624 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 MUTYHQ9UIF7 546 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 CFAP20Q9Y6A4 193 aaKnown RBP13.71□□□□□ -0.21
SRP54-202ENST00000546080 V9GYH0 126 aa13.71□□□□□ -0.21
SRP54-202ENST00000546080 ACSL4O60488 711 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 GPX5O75715 221 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 PRAMEF12O95522 483 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 NUDT7P0C024 238 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 IL7P13232 177 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 PTX3P26022 381 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms