RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	FAM167B	Q9BTA0	163 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	NAT9	Q9BTE0	207 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	CDADC1	Q9BWV3	514 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	SLC7A5P2	Q9GIP4	190 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	CCDC68	Q9H2F9	335 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	IL1RAPL1	Q9NZN1	696 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	KLHL42	Q9P2K6	505 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	ASIC3	Q9UHC3	531 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	SLC39A10	Q9ULF5	831 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	SNX7	Q9UNH6	387 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	PLCL2	Q9UPR0	1127 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	RUVBL2	Q9Y230	463 aa	Known RBP	7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	MAN2B2	Q9Y2E5	1009 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	KLK4	Q9Y5K2	254 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	NFS1	Q9Y697	457 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	MAD1L1	Q9Y6D9	718 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	COMMD10	Q9Y6G5	202 aa		7.37	□□□□□ -1.23
SNHG1-223	ENST00000545440	CNTRL	Q7Z7A1	2325 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	MKRN2OS	H3BPM6	223 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	MYO1C	O00159	1063 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	EIF3F	O00303	357 aa	Predicted RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	SUV39H1	O43463	412 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	HCRTR1	O43613	425 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	PRICKLE3	O43900	615 aa	Predicted RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	PSIP1	O75475	530 aa	Known RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	TTC4	O95801	387 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	TGFB1	P01137	390 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	CAT	P04040	527 aa	Known RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	CAPN1	P07384	714 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	ENO3	P13929	434 aa	Predicted RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	NAT1	P18440	290 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	CHRM3	P20309	590 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	AGXT	P21549	392 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	ECI1	P42126	302 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	GNG11	P61952	73 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	RPS18	P62269	152 aa	Known RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	EGR3	Q06889	387 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	CRYM	Q14894	314 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	ARHGAP19	Q14CB8	494 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	MORF4L2	Q15014	288 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	CYP2A13	Q16696	494 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	PTCHD3	Q3KNS1	767 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	LACTB2	Q53H82	288 aa	Predicted RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	YOD1	Q5VVQ6	348 aa	Predicted RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	PAPD7	Q5XG87	772 aa	Known RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	ATG14	Q6ZNE5	492 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	TAX1BP1	Q86VP1	789 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	KCNMB4	Q86W47	210 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	DENND6A	Q8IWF6	608 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	CNTN4	Q8IWV2	1026 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	DNAJC22	Q8N4W6	341 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	LMNTD1	Q8N9Z9	388 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	OR2L3	Q8NG85	312 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	GABPB2	Q8TAK5	448 aa	Predicted RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	DENND1A	Q8TEH3	1009 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	DLG3	Q92796	817 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	FAM136A	Q96C01	138 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	GBP5	Q96PP8	586 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	NAPG	Q99747	312 aa	Predicted RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	FAM114A2	Q9NRY5	505 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	C20orf96	Q9NUD7	363 aa	Predicted RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	EURL	Q9NYK6	297 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	CIDEB	Q9UHD4	219 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	ANAPC2	Q9UJX6	822 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	FARSA	Q9Y285	508 aa	Known RBP	7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	MED16	Q9Y2X0	877 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	SAR1B	Q9Y6B6	198 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	FAM169A	Q9Y6X4	670 aa		7.36	□□□□□ -1.23
SNHG1-223	ENST00000545440	DOPEY2	Q9Y3R5	2298 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440		A0A1B0GX78	115 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440		A0A1W2PPV9	198 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	SHISA3	A0PJX4	238 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	ZNF839	A8K0R7	811 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	ARHGEF33	A8MVX0	844 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	TARM1	B6A8C7	271 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	CCDC188	H7C350	402 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	CD63	P08962	238 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	CBSL	P0DN79	551 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	IVD	P26440	423 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	CBS	P35520	551 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	HSD17B2	P37059	387 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	ARSF	P54793	590 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	MPP1	Q00013	466 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	MAP4K2	Q12851	820 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	CTBP1	Q13363	440 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	SF1	Q15637	639 aa	Known RBP	7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	KLHL38	Q2WGJ6	581 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	CCSMST1	Q4G0I0	132 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	HSP90AA5P	Q58FG0	334 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	ACSBG2	Q5FVE4	666 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	TCTE1	Q5JU00	501 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	SPANXN3	Q5MJ09	141 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	FCRL6	Q6DN72	434 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	LCN10	Q6JVE6	187 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	LRRC8E	Q6NSJ5	796 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	TCTN3	Q6NUS6	607 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	KIAA0408	Q6ZU52	694 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	RNF44	Q7L0R7	432 aa		7.35	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms