RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ERVW-1Q9UQF0 538 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 POFUT2Q9Y2G5 429 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PRSS21Q9Y6M0 314 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 AIREO43918 545 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 FGBP02675 491 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 RPLP0P05388 317 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 CCL5P13501 91 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 TYRP14679 529 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ZNF10P21506 573 aaPredicted RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 PAICSP22234 425 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 HSD17B2P37059 387 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CSNK1DP48730 415 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 TAS2R41P59536 307 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 MVKQ03426 396 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 RGS1Q08116 209 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SLC36A3Q495N2 470 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 DCST1Q5T197 706 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ZNF697Q5TEC3 545 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 OTOP2Q7RTS6 562 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PIANPQ8IYJ0 282 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CDK20Q8IZL9 346 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 OR2T11Q8NH01 316 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 NFKBIDQ8NI38 313 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PDLIM5Q96HC4 596 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 ACAT2Q9BWD1 397 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 MARCH5Q9NX47 278 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 THUMPD1Q9NXG2 353 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 SPATA7Q9P0W8 599 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 HSFX1Q9UBD0 423 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CD300AQ9UGN4 299 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 MKLN1Q9UL63 735 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 NCKAP1Q9Y2A7 1128 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ARNTLO00327 626 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 E2F3O00716 465 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ZW10O43264 779 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PRMT3O60678 531 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CCNYL3P0C7X3 344 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ANXA8P13928 327 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CD70P32970 193 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 BUD31P41223 144 aaPredicted RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 KHKP50053 298 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SGSHP51688 502 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CLDN8P56748 225 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 RPS13P62277 151 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 HSPB3Q12988 150 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS50-220ENST00000544910 AGTRAPQ6RW13 159 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CHERPQ8IWX8 916 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 PGBD3Q8N328 593 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CBARPQ8N350 705 aaPredicted RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 MFSD2AQ8NA29 543 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 OR8H1Q8NGG4 311 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 GEMIN6Q8WXD5 167 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 GTPBP3Q969Y2 492 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 EXOSC8Q96B26 276 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 COPS4Q9BT78 406 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 C11orf16Q9NQ32 467 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 IL17CQ9P0M4 197 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SARDHQ9UL12 918 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 A0A0G2JMZ2 1700 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 A0A0U1RQS6 177 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 EIF3FO00303 357 aaPredicted RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 SCAMP2O15127 329 aaKnown RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 FGF18O76093 207 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 ACRP10323 421 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 KELP23276 732 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 HOXD9P28356 352 aaPredicted RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 PGFP49763 221 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 ATP12AP54707 1039 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 PMS2P3Q13401 168 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 RFTN2Q52LD8 501 aaPredicted RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 ZNF648Q5T619 568 aaPredicted RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 KIAA1614Q5VZ46 1190 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 GPR153Q6NV75 609 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 BORAQ6PGQ7 559 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 RBM23Q86U06 439 aaKnown RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 TSPAN33Q86UF1 283 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 ZZZ3Q8IYH5 903 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 PM20D2Q8IYS1 436 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 CAMKK1Q8N5S9 505 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 UXS1Q8NBZ7 420 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 GALNT6Q8NCL4 622 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 OR10Q1Q8NGQ4 319 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 FIBINQ8TAL6 211 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 MNTQ99583 582 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 PKMYT1Q99640 499 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 YIPF2Q9BWQ6 316 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 CWH43Q9H720 699 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 TPT1P8Q9HAU6 139 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 DEC1Q9P2X7 70 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 SEC14L3Q9UDX4 400 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 ZNF780BQ9Y6R6 833 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 A0A1W2PRB8 838 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 EFCAB9A8MZ26 197 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 H0Y858 1186 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 TSPAN4O14817 238 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 YES1P07947 543 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 GSTM2P28161 218 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 SSR2P43308 183 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 SUOXP51687 545 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms