RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 IGKV1-8A0A0C4DH67 115 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 TMEM200CA6NKL6 621 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 USP27XA6NNY8 438 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 TFECO14948 347 aaPredicted RBP13.74□□□□□ -0.21
COPS7A-220ENST00000544725 P2RX6O15547 441 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 MAN1A2O60476 641 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 NSA2O95478 260 aaKnown RBP13.74□□□□□ -0.21
COPS7A-220ENST00000544725 ERGP11308 486 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 FOSL1P15407 271 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 PTGER1P34995 402 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 CTNNA1P35221 906 aaKnown RBP13.74□□□□□ -0.21
COPS7A-220ENST00000544725 XCR1P46094 333 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 PRDX1Q06830 199 aaKnown RBP13.74□□□□□ -0.21
COPS7A-220ENST00000544725 ACTN3Q08043 901 aaPredicted RBP13.74□□□□□ -0.21
COPS7A-220ENST00000544725 TSTA3Q13630 321 aaPredicted RBP13.74□□□□□ -0.21
COPS7A-220ENST00000544725 ANKRD20A4Q4UJ75 823 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 ICE2Q659A1 982 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 CAVIN1Q6NZI2 390 aaKnown RBP13.74□□□□□ -0.21
COPS7A-220ENST00000544725 PAPD4Q6PIY7 484 aaKnown RBP13.74□□□□□ -0.21
COPS7A-220ENST00000544725 ADCK2Q7Z695 626 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 LDB1Q86U70 411 aaPredicted RBP13.74□□□□□ -0.21
COPS7A-220ENST00000544725 LRRC6Q86X45 466 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 MARVELD2Q8N4S9 558 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 CPSF7Q8N684 471 aaKnown RBP13.74□□□□□ -0.21
COPS7A-220ENST00000544725 OR51Q1Q8NH59 317 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 LPAR4Q99677 370 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 UCK2Q9BZX2 261 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 TP63Q9H3D4 680 aaPredicted RBP13.74□□□□□ -0.21
COPS7A-220ENST00000544725 CATSPERZQ9NTU4 200 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 PCDHA3Q9Y5H8 950 aa13.74□□□□□ -0.21
COPS7A-220ENST00000544725 AKAP6Q13023 2319 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 A0A1B0GTH9 108 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 ERI2A8K979 691 aaKnown RBP13.73□□□□□ -0.21
COPS7A-220ENST00000544725 NDC80O14777 642 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 MAGEA1P43355 309 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 CYB561P49447 251 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 ABATP80404 500 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 ARHGAP19Q14CB8 494 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 SFT2D3Q587I9 215 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 PCGF5Q86SE9 256 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 RPS19BP1Q86WX3 136 aaKnown RBP13.73□□□□□ -0.21
COPS7A-220ENST00000544725 CLYBLQ8N0X4 340 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 PEX13Q92968 403 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 TMEM125Q96AQ2 219 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 ZNF778Q96MU6 729 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 P2RY12Q9H244 342 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 GSX1Q9H4S2 264 aaPredicted RBP13.73□□□□□ -0.21
COPS7A-220ENST00000544725 CDCP1Q9H5V8 836 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 DNAJB12Q9NXW2 375 aaKnown RBP13.73□□□□□ -0.21
COPS7A-220ENST00000544725 HCN3Q9P1Z3 774 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 TAC3Q9UHF0 121 aa13.73□□□□□ -0.21
COPS7A-220ENST00000544725 R3HDM2Q9Y2K5 976 aaKnown RBP13.73□□□□□ -0.21
COPS7A-220ENST00000544725 GOLGA6L9A6NEM1 432 aa13.72□□□□□ -0.21
COPS7A-220ENST00000544725 ZNF839A8K0R7 811 aa13.72□□□□□ -0.21
COPS7A-220ENST00000544725 HAT1O14929 419 aa13.72□□□□□ -0.21
COPS7A-220ENST00000544725 CD3EAPO15446 510 aaKnown RBP13.72□□□□□ -0.21
COPS7A-220ENST00000544725 PRMT3O60678 531 aa13.72□□□□□ -0.21
COPS7A-220ENST00000544725 MFAP3LO75121 409 aa13.72□□□□□ -0.21
COPS7A-220ENST00000544725 MATN4O95460 622 aa13.72□□□□□ -0.21
COPS7A-220ENST00000544725 PTMAP06454 111 aaKnown RBP13.72□□□□□ -0.21
COPS7A-220ENST00000544725 HSD17B2P37059 387 aa13.72□□□□□ -0.21
COPS7A-220ENST00000544725 RWDD2BP57060 319 aa13.72□□□□□ -0.21
COPS7A-220ENST00000544725 FOXD4Q12950 439 aaPredicted RBP13.72□□□□□ -0.21
COPS7A-220ENST00000544725 USP10Q14694 798 aaKnown RBP13.72□□□□□ -0.21
COPS7A-220ENST00000544725 PPP1R21Q6ZMI0 780 aa13.72□□□□□ -0.21
COPS7A-220ENST00000544725 EBNA1BP2Q99848 306 aaKnown RBP13.72□□□□□ -0.21
COPS7A-220ENST00000544725 FAM114A2Q9NRY5 505 aa13.72□□□□□ -0.21
COPS7A-220ENST00000544725 MARCH4Q9P2E8 410 aaPredicted RBP13.72□□□□□ -0.21
COPS7A-220ENST00000544725 EDARQ9UNE0 448 aa13.72□□□□□ -0.21
COPS7A-220ENST00000544725 TCAF1Q9Y4C2 921 aa13.72□□□□□ -0.21
COPS7A-220ENST00000544725 OR2W5A6NFC9 320 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 MYO1CO00159 1063 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 CBFA2T2O43439 604 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 CDC40O60508 579 aaKnown RBP eCLIP13.71□□□□□ -0.21
COPS7A-220ENST00000544725 NDUFS3O75489 264 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 TFEBP19484 476 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 RPS3P23396 243 aaKnown RBP eCLIP13.71□□□□□ -0.21
COPS7A-220ENST00000544725 TPP2P29144 1249 aaPredicted RBP13.71□□□□□ -0.21
COPS7A-220ENST00000544725 ATP5DP30049 168 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 BCL6P41182 706 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 PNLIPRP1P54315 467 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 GDF10P55107 478 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 SLC26A5P58743 744 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 ABRAXAS2Q15018 415 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 NSDHLQ15738 373 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 CEBPEQ15744 281 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.71□□□□□ -0.21
COPS7A-220ENST00000544725 ZNF468Q5VIY5 522 aaPredicted RBP13.71□□□□□ -0.21
COPS7A-220ENST00000544725 ACAD11Q709F0 780 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 PRSS41Q7RTY9 318 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 PLD3Q8IV08 490 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 CCDC71Q8IV32 467 aaPredicted RBP13.71□□□□□ -0.21
COPS7A-220ENST00000544725 MPP5Q8N3R9 675 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 PLPP5Q8NEB5 264 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 MYRIPQ8NFW9 859 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 TRIM45Q9H8W5 580 aaPredicted RBP13.71□□□□□ -0.21
COPS7A-220ENST00000544725 DLL4Q9NR61 685 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 ST6GALNAC2Q9UJ37 374 aa13.71□□□□□ -0.21
COPS7A-220ENST00000544725 TSR3Q9UJK0 312 aaKnown RBP13.71□□□□□ -0.21
COPS7A-220ENST00000544725 KLF13Q9Y2Y9 288 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms