RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 RIC8BQ9NVN3 520 aa5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 P4HTMQ9NXG6 502 aa5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 GPRC5BQ9NZH0 403 aa5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 STOX2Q9P2F5 926 aaPredicted RBP5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 DHCR7Q9UBM7 475 aaKnown RBP5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 TRPC4Q9UBN4 977 aa5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 ADGRE2Q9UHX3 823 aa5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 RNF112Q9ULX5 631 aa5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 TMCO1Q9UM00 188 aa5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 VPS4AQ9UN37 437 aa5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 PDE10AQ9Y233 779 aa5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 MRPS33Q9Y291 106 aaKnown RBP5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 OARD1Q9Y530 152 aa5.35□□□□□ -1.55
CLSTN3-215ENST00000544584 OTOGQ6ZRI0 2925 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 CELSR2Q9HCU4 2923 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 MED13LQ71F56 2210 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 A0A087X1B8 175 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 NSG1A0A0A6YYJ2 146 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ANKDD1BA6NHY2 528 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 CLDN4O14493 209 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 OR1F1O43749 312 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 STK16O75716 305 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 KLF7O75840 302 aaPredicted RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 WFS1O76024 890 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 NSA2O95478 260 aaKnown RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 MLYCDO95822 493 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 GUCA1CO95843 209 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 HPP00738 406 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 INHBAP08476 426 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ZGLP1P0C6A0 271 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 TPBGLP0DKB5 382 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 SPTBP11277 2137 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ZNF37AP17032 561 aaPredicted RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 F8A1P23610 371 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 PSMB5P28074 263 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 PEBP1P30086 187 aaKnown RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 GABRA4P48169 554 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 PIK3CGP48736 1102 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 SERPINB9P50453 376 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 EMP2P54851 167 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 CDKN2DP55273 166 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 SOX8P57073 446 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 TAS2R50P59544 299 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 RAB10P61026 200 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 GUCY2DQ02846 1103 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ACTN3Q08043 901 aaPredicted RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 C2orf54Q08AI8 447 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 SRSF6Q13247 344 aaKnown RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ATP1A4Q13733 1029 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ELOAQ14241 798 aaKnown RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 FASTKQ14296 549 aaKnown RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 MYBPC3Q14896 1274 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 SLC9A5Q14940 896 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 NKG7Q16617 165 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 MSS51Q4VC12 460 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ZNF789Q5FWF6 425 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 DCAF10Q5QP82 559 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 MFSD4BQ5TF39 518 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ZNF425Q6IV72 752 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 MRPL14Q6P1L8 145 aaKnown RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 METTL2BQ6P1Q9 378 aaKnown RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 FBXO42Q6P3S6 717 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 CAPN12Q6ZSI9 719 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 NDUFAF7Q7L592 441 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 MRGPREQ86SM8 312 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ASPGQ86U10 573 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 GPSM1Q86YR5 675 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 IFT20Q8IY31 132 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 KBTBD2Q8IY47 623 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 MMGT1Q8N4V1 131 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 HORMAD2Q8N7B1 307 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ABHD11Q8NFV4 315 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 OR56A3Q8NH54 315 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 FLVCR1-AS1Q8TAF5 88 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 SLC5A11Q8WWX8 675 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 REPS1Q96D71 796 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 MAGEB10Q96LZ2 347 aaPredicted RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 OR1F2PQ96R84 312 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 FMO2Q99518 471 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 GPR22Q99680 433 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 TUBB6Q9BUF5 446 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 EFCAB11Q9BUY7 163 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 SGPP1Q9BX95 441 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 LHPPQ9H008 270 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ILKAPQ9H0C8 392 aaPredicted RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ATG10Q9H0Y0 220 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ZNF71Q9NQZ8 489 aaPredicted RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 AGPAT4Q9NRZ5 378 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 WWOXQ9NZC7 414 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 CD274Q9NZQ7 290 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 CIDEBQ9UHD4 219 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ZFP69BQ9UJL9 534 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 C3orf18Q9UK00 162 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 RUVBL2Q9Y230 463 aaKnown RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ACOT9Q9Y305 439 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 MRPS2Q9Y399 296 aaKnown RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 ANGPTL3Q9Y5C1 460 aa5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 TNPO3Q9Y5L0 923 aaKnown RBP5.34□□□□□ -1.55
CLSTN3-215ENST00000544584 SLC22A7Q9Y694 548 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms