RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 RBMX2Q9Y388 322 aaKnown RBP12.42□□□□□ -0.42
CHD4-211ENST00000544484 MYH11P35749 1972 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 PTGESO14684 152 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 TYROBPO43914 113 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 MAFKO60675 156 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 STC2O76061 302 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 RPL26P61254 145 aaKnown RBP12.42□□□□□ -0.42
CHD4-211ENST00000544484 E2F2Q14209 437 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 ITPRIPL2Q3MIP1 535 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 LCN1P1Q5VSP4 162 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 NPAS3Q8IXF0 933 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 PCDHB11Q9Y5F2 797 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 A0A1W2PP55 124 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 TLX3O43711 291 aaPredicted RBP12.42□□□□□ -0.42
CHD4-211ENST00000544484 ZNF623O75123 536 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 APLP1P51693 650 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 C15orf39Q6ZRI6 1047 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 METTL27Q8N6F8 245 aaPredicted RBP12.42□□□□□ -0.42
CHD4-211ENST00000544484 AURKBQ96GD4 344 aaPredicted RBP12.42□□□□□ -0.42
CHD4-211ENST00000544484 HSH2DQ96JZ2 352 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 TIMMDC1Q9NPL8 285 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 CENPMQ9NSP4 180 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 MARCH4Q9P2E8 410 aaPredicted RBP12.42□□□□□ -0.42
CHD4-211ENST00000544484 TMED5Q9Y3A6 229 aa12.42□□□□□ -0.42
CHD4-211ENST00000544484 H3BSH0 61 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 TLR4O00206 839 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 ACADLP28330 430 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 EMX2Q04743 252 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 PRRT3Q5FWE3 981 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 UMODL1-AS1Q8N2C9 162 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 OR2L5Q8NG80 312 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 COQ8BQ96D53 544 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 NDC1Q9BTX1 674 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 CDC14AQ9UNH5 594 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 ARFGEF2Q9Y6D5 1785 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 ZNF805Q5CZA5 627 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 SLC30A8Q8IWU4 369 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 PTGDR2Q9Y5Y4 395 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 RENP00797 406 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 SCN1BQ07699 218 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 PTGR1Q14914 329 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 PRPF38BQ5VTL8 546 aaKnown RBP12.41□□□□□ -0.42
CHD4-211ENST00000544484 PSAPL1Q6NUJ1 521 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 GALNT7Q86SF2 657 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 RNF130Q86XS8 419 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 TTC9BQ8N6N2 239 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 STON2Q8WXE9 905 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 OVCA2Q8WZ82 227 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 FARSBQ9NSD9 589 aaKnown RBP12.41□□□□□ -0.42
CHD4-211ENST00000544484 ACTR3BQ9P1U1 418 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 CLDN25C9JDP6 229 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 CEP97Q8IW35 865 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 IQCF2Q8IXL9 164 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 TRIM2Q9C040 744 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 PRSS51A0A1B0GVH4 220 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 TBX1O43435 398 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 KLF8O95600 359 aaPredicted RBP12.41□□□□□ -0.42
CHD4-211ENST00000544484 SGCBQ16585 318 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 ARHGAP40Q5TG30 622 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 ERN2Q76MJ5 926 aaKnown RBP12.41□□□□□ -0.42
CHD4-211ENST00000544484 PYURFQ96I23 114 aa12.41□□□□□ -0.42
CHD4-211ENST00000544484 MYOCOSA0A1B0GUC4 107 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 FABP12A6NFH5 140 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 TTC34A8MYJ7 566 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 SOCS5O75159 536 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 RPP14O95059 124 aaKnown RBP12.4□□□□□ -0.42
CHD4-211ENST00000544484 ATP5A1P25705 553 aaKnown RBP12.4□□□□□ -0.42
CHD4-211ENST00000544484 ALDH3A2P51648 485 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 RING1Q06587 406 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 NPWQ8N729 165 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 AQP11Q8NBQ7 271 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 OR2AJ1Q8NGZ0 328 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 BADQ92934 168 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 THUMPD1Q9NXG2 353 aaKnown RBP12.4□□□□□ -0.42
CHD4-211ENST00000544484 PEX16Q9Y5Y5 336 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 IGKV6-21A0A0C4DH24 114 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 FAM170BA6NMN3 283 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 TRIM3O75382 744 aaPredicted RBP12.4□□□□□ -0.42
CHD4-211ENST00000544484 ITGB1P05556 798 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 CD2P06729 351 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 PFKMP08237 780 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 OR1E2P47887 323 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 SMCO1Q147U7 214 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 C6orf136Q5SQH8 315 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 PLA2G15Q8NCC3 412 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 TNFAIP8L1Q8WVP5 186 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 ABI3Q9P2A4 366 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 SLC10A3P09131 477 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 GMFBP60983 142 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 TSPAN5P62079 268 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 RAB2BQ8WUD1 216 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 MAGEE1Q9HCI5 957 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 CLIC3O95833 236 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 BCAP31P51572 246 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 UAP1L1Q3KQV9 507 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.4□□□□□ -0.425e-10■■■■■ 31.7
CHD4-211ENST00000544484 ZNF676Q8N7Q3 588 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 ZNF641Q96N77 438 aaPredicted RBP12.4□□□□□ -0.42
CHD4-211ENST00000544484 ZNF487B1APH4 448 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 MATN1P21941 496 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms