RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PRKACAP17612 351 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 HOXD12P35452 270 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 TRIM23P36406 574 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 RABIFP47224 123 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 DIO1P49895 249 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ADAM17P78536 824 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 TRAF3Q13114 568 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 OLIG2Q13516 323 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PTPRCAPQ14761 206 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 TBRG1Q3YBR2 411 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 USP53Q70EK8 1073 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 CXXC5Q7LFL8 322 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 C12orf40Q86WS4 652 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM13CQ8NE31 585 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 DNAJB8Q8NHS0 232 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 LMO3Q8TAP4 145 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 KAT2AQ92830 837 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 BORCS6Q96GS4 357 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ANKRD27Q96NW4 1050 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 KIFC1Q9BW19 673 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 OR8D2Q9GZM6 311 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SPRTNQ9H040 489 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 LRMDAQ9H2I8 198 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SAV1Q9H4B6 383 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 METTL7AQ9H8H3 244 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 GALPQ9UBC7 116 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 BTAF1O14981 1849 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 MYH1P12882 1939 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 A8MT66 165 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 K7ERQ8 282 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PSIP1O75475 530 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 CYP4B1P13584 511 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 ADRB3P13945 408 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 HNRNPA2B1P22626 353 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 MYL9P24844 172 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 CARD18P57730 90 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 DECR1Q16698 335 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 MARCH8Q5T0T0 291 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PAOXQ6QHF9 649 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 ABRAXAS1Q6UWZ7 409 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 C15orf39Q6ZRI6 1047 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 HIPK1Q86Z02 1210 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 OR10A6Q8NH74 314 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 GPER1Q99527 375 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 DERL2Q9GZP9 239 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 XKR8Q9H6D3 395 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 MVB12BQ9H7P6 319 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 TRIM39Q9HCM9 518 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 C12orf4Q9NQ89 552 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 HCN2Q9UL51 889 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 SCDO00767 359 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 NME6O75414 186 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 CXCR1P25024 350 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 MSX2P35548 267 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC26A3P40879 764 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 GDF5P43026 501 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PXNP49023 591 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 LIMK1P53667 647 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 SCAPQ12770 1279 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 ENPP2Q13822 863 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 GPR68Q15743 365 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 UGT3A2Q3SY77 523 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PDSS1Q5T2R2 415 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 C6orf183Q5T699 404 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PLXDC1Q8IUK5 500 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 CLVS1Q8IUQ0 354 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 RBM12BQ8IXT5 1001 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 UXS1Q8NBZ7 420 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 TRPV1Q8NER1 839 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 OR52J3Q8NH60 311 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 LRRC15Q8TF66 581 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PEX13Q92968 403 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 ARL5BQ96KC2 179 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 MKKSQ9NPJ1 570 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF358Q9NW07 568 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PDP1Q9P0J1 537 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 LAMP5Q9UJQ1 280 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 C4AP0C0L4 1744 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 H7BY64 318 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 AKAP8O43823 692 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 OR5F1O95221 314 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 CDH1P12830 882 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 HRH2P25021 359 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PIK3CBP42338 1070 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 VSX2P58304 361 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 RPS15P62841 145 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM182AQ5T1J6 154 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 RSBN1Q5VWQ0 802 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 ZCCHC12Q6PEW1 402 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 SPPL2CQ8IUH8 684 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 SFRP1Q8N474 314 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 BANPQ8N9N5 519 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 KLHDC9Q8NEP7 349 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 GTPBP3Q969Y2 492 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PRAP1Q96NZ9 151 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 LENG8Q96PV6 779 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 HHIPQ96QV1 700 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 GPR22Q99680 433 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 MRM3Q9HC36 420 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms