RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	SF3A3	Q12874	501 aa	Known RBP eCLIP	6.18	□□□□□ -1.42
CIT-213	ENST00000543324	GTF2H3	Q13889	308 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	OASL	Q15646	514 aa	Known RBP	6.18	□□□□□ -1.42
CIT-213	ENST00000543324	SEPT7	Q16181	437 aa	Known RBP	6.18	□□□□□ -1.42
CIT-213	ENST00000543324	GPR33	Q49SQ1	333 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	ZNF789	Q5FWF6	425 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	SNAP47	Q5SQN1	464 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	C6orf163	Q5TEZ5	329 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	ZNF449	Q6P9G9	518 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	TMEM220	Q6QAJ8	160 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	PACS1	Q6VY07	963 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	FAM47E	Q6ZV65	393 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	SNX20	Q7Z614	316 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	CCDC25	Q86WR0	208 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	KMT5C	Q86Y97	462 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	KBTBD2	Q8IY47	623 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	PIANP	Q8IYJ0	282 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	D2HGDH	Q8N465	521 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	ESX1	Q8N693	406 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	LILRA3	Q8N6C8	439 aa	Predicted RBP	6.18	□□□□□ -1.42
CIT-213	ENST00000543324	BEND7	Q8N7W2	519 aa	Predicted RBP	6.18	□□□□□ -1.42
CIT-213	ENST00000543324	CCDC89	Q8N998	374 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	FDCSP	Q8NFU4	85 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	HM13	Q8TCT9	377 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	ZNF75CP	Q92670	426 aa	Predicted RBP	6.18	□□□□□ -1.42
CIT-213	ENST00000543324	TGM7	Q96PF1	710 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	FAM118B	Q9BPY3	351 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	TBL1Y	Q9BQ87	522 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	C19orf24	Q9BVV8	132 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	C1orf21	Q9H246	121 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	TIMMDC1	Q9NPL8	285 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	ACSS2	Q9NR19	701 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	NLE1	Q9NVX2	485 aa	Predicted RBP	6.18	□□□□□ -1.42
CIT-213	ENST00000543324	GALNT8	Q9NY28	637 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	ARMCX1	Q9P291	453 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	ANAPC5	Q9UJX4	755 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	POMT2	Q9UKY4	750 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	ACSL5	Q9ULC5	683 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	RIMKLB	Q9ULI2	386 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	PLEKHA6	Q9Y2H5	1048 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	CPAMD8	Q8IZJ3	1885 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	EXOC1L	A0A1B0GW35	172 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	C2orf81	A6NN90	581 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	DNALI1	O14645	258 aa	Predicted RBP	6.17	□□□□□ -1.42
CIT-213	ENST00000543324	KLF11	O14901	512 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	BIRC5	O15392	142 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	GYG2	O15488	501 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	PEX1	O43933	1283 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	SPAG6	O75602	509 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CREG1	O75629	220 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CLDN14	O95500	239 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CRTAM	O95727	393 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	AP2A1	O95782	977 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	GSTM1	P09488	218 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	DHRS4L1	P0CG22	281 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	ANPEP	P15144	967 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	HADHA	P40939	763 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	HAL	P42357	657 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	MAGEA4	P43358	317 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	MAPK9	P45984	424 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CD151	P48509	253 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CDKN1C	P49918	316 aa	Predicted RBP	6.17	□□□□□ -1.42
CIT-213	ENST00000543324	SERPINB8	P50452	374 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	KPNA2	P52292	529 aa	Known RBP	6.17	□□□□□ -1.42
CIT-213	ENST00000543324	ACTR3	P61158	418 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	HPCA	P84074	193 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	ADORA2A-AS1	P86434	159 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	GSTM4	Q03013	218 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	ASPH	Q12797	758 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	RPA4	Q13156	261 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CBLB	Q13191	982 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	TMED1	Q13445	227 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	TMED2	Q15363	201 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CCNG2	Q16589	344 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	DNAL1	Q4LDG9	190 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	FNBP1L	Q5T0N5	605 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	C1QTNF12	Q5T7M4	302 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CACHD1	Q5VU97	1274 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	DRICH1	Q6PGQ1	229 aa	Predicted RBP	6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CERS6	Q6ZMG9	384 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CENPU	Q71F23	418 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CAMKMT	Q7Z624	323 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	BPHL	Q86WA6	291 aa	Predicted RBP	6.17	□□□□□ -1.42
CIT-213	ENST00000543324	PDSS2	Q86YH6	399 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	TRIM48	Q8IWZ4	208 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CIART	Q8N365	385 aa	Predicted RBP	6.17	□□□□□ -1.42
CIT-213	ENST00000543324	OR13J1	Q8NGT2	312 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	FLVCR1-AS1	Q8TAF5	88 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	HEXDC	Q8WVB3	486 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	MCUR1	Q96AQ8	359 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	ULK4	Q96C45	1275 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	ZNF501	Q96CX3	271 aa	Predicted RBP	6.17	□□□□□ -1.42
CIT-213	ENST00000543324	CXorf40B	Q96DE9	158 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	ZDHHC12	Q96GR4	267 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	DNAJC1	Q96KC8	554 aa	Known RBP	6.17	□□□□□ -1.42
CIT-213	ENST00000543324	LRFN5	Q96NI6	719 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	BTBD9	Q96Q07	612 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	OR6C1	Q96RD1	312 aa		6.17	□□□□□ -1.42
CIT-213	ENST00000543324	SMAD5	Q99717	465 aa	Known RBP	6.17	□□□□□ -1.42
CIT-213	ENST00000543324	MAP3K3	Q99759	626 aa		6.17	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms