RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 ENO2P09104 434 aaPredicted RBP14.81□□□□□ -0.04
VPS33A-206ENST00000542310 HIST1H2AGP0C0S8 130 aaPredicted RBP14.81□□□□□ -0.04
VPS33A-206ENST00000542310 RNF224P0DH78 156 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 ICAM2P13598 275 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 EDN3P14138 238 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 HIST1H2ADP20671 130 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 GRK3P35626 688 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 CDKN2DP55273 166 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 IL2P60568 153 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 CDC16Q13042 620 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 PDAP1Q13442 181 aaKnown RBP14.81□□□□□ -0.04
VPS33A-206ENST00000542310 PCOLCEQ15113 449 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 BBS9Q3SYG4 887 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 MSS51Q4VC12 460 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 STEAP4Q687X5 459 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 CAPN13Q6MZZ7 669 aaPredicted RBP14.81□□□□□ -0.04
VPS33A-206ENST00000542310 FAM45BPQ6NSW5 357 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 FAM45AQ8TCE6 357 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 BRIX1Q8TDN6 353 aaKnown RBP14.81□□□□□ -0.04
VPS33A-206ENST00000542310 PSMF1Q92530 271 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 TM4SF19Q96DZ7 209 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 HIST1H2AHQ96KK5 128 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 CNDP1Q96KN2 507 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 HIST1H2AJQ99878 128 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 H2AFJQ9BTM1 129 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 TUBB6Q9BUF5 446 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 RNF32Q9H0A6 362 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 KCNF1Q9H3M0 494 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 C19orf25Q9UFG5 118 aaPredicted RBP14.81□□□□□ -0.04
VPS33A-206ENST00000542310 MKL2Q9ULH7 1088 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 SVILO95425 2214 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 FFAR3O14843 346 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 GPR42O15529 346 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 BANF1O75531 89 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 KLHL18O94889 574 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 SLC35G6P0C7Q6 338 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 C8orf89P0DMQ9 161 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 ARG2P78540 354 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 PHKG1Q16816 387 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 TEDDM1Q5T9Z0 273 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 DUPD1Q68J44 220 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 FAM180AQ6UWF9 173 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 MBOAT1Q6ZNC8 495 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 LINC00696Q6ZRV3 163 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 ASPGQ86U10 573 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 SPNS2Q8IVW8 549 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 ABHD11Q8NFV4 315 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 OR9A4Q8NGU2 314 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 OR56A3Q8NH54 315 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 GRHL3Q8TE85 626 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 FAR1Q8WVX9 515 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 METTL21AQ8WXB1 218 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 ATL1Q8WXF7 558 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 C5orf34Q96MH7 638 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 PLAC1Q9HBJ0 212 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 ERRFI1Q9UJM3 462 aaPredicted RBP14.8□□□□□ -0.04
VPS33A-206ENST00000542310 SCN3AQ9NY46 2000 aa14.8□□□□□ -0.04
VPS33A-206ENST00000542310 TRAV17A0A0B4J275 112 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 BCL6P41182 706 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 AGTR2P50052 363 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 TNFSF10P50591 281 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 MAT1AQ00266 395 aaKnown RBP14.79□□□□□ -0.04
VPS33A-206ENST00000542310 DR1Q01658 176 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 NAE1Q13564 534 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 SYT16Q17RD7 645 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 HECTD2Q5U5R9 776 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 NIPAL1Q6NVV3 410 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 HIBCHQ6NVY1 386 aaPredicted RBP14.79□□□□□ -0.04
VPS33A-206ENST00000542310 STRA8Q7Z7C7 330 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 IGDCC3Q8IVU1 814 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 BCORP1Q8N888 145 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 MFSD9Q8NBP5 474 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 HAS2Q92819 552 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 FBXL8Q96CD0 374 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 PDLIM5Q96HC4 596 aaKnown RBP14.79□□□□□ -0.04
VPS33A-206ENST00000542310 IMMP1LQ96LU5 166 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 SLX1AQ9BQ83 275 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 TRIM54Q9BYV2 358 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 VN1R1Q9GZP7 353 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 ATG10Q9H0Y0 220 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 ANKHQ9HCJ1 492 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 TRMT1Q9NXH9 659 aaKnown RBP14.79□□□□□ -0.04
VPS33A-206ENST00000542310 PTGFRNQ9P2B2 879 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 CHMP2BQ9UQN3 213 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 SH2B3Q9UQQ2 575 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 SLC22A7Q9Y694 548 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 TEX264Q9Y6I9 313 aa14.79□□□□□ -0.04
VPS33A-206ENST00000542310 UTP20O75691 2785 aaKnown RBP14.79□□□□□ -0.04
VPS33A-206ENST00000542310 UNC79Q9P2D8 2635 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 CCDC188H7C350 402 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 NDC80O14777 642 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 WFS1O76024 890 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 CDH1P12830 882 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 IL1RNP18510 177 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 IL10P22301 178 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 ELK3P41970 407 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 CCR8P51685 355 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 EFNA3P52797 238 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 ARL4CP56559 192 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 SKP1P63208 163 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms