RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 GPC2Q8N158 579 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 S100A16Q96FQ6 103 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 PKP4Q99569 1192 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 TMEM106CQ9BVX2 250 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 NEUROD4Q9HD90 331 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 MAPK3P27361 379 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 INCA1Q0VD86 236 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 ST3GAL3Q11203 375 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 VMACQ2NL98 169 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 PIM3Q86V86 326 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 OR10T2Q8NGX3 314 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 NPLQ9BXD5 320 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 ZCCHC3Q9NUD5 404 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 TMEM45AQ9NWC5 275 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 CUEDC1Q9NWM3 386 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 EXTL2Q9UBQ6 330 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 STYXL1Q9Y6J8 313 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 DPY19L3Q6ZPD9 716 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 NFKBIDQ8NI38 313 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 GPR152Q8TDT2 470 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 C2orf15Q8WU43 125 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 CYTH4Q9UIA0 394 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 OR2AG2A6NM03 316 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 FAM170BA6NMN3 283 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 OR1F1O43749 312 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 RENP00797 406 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 GNAO1P09471 354 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 IDSP22304 550 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 BLOC1S3Q6QNY0 202 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 CXCL17Q6UXB2 119 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 Q8N402 240 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 SCRN2Q96FV2 425 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 ZNF285Q96NJ3 590 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 TWNKQ96RR1 684 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 FAM129BQ96TA1 746 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 TSSK6Q9BXA6 273 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 C14orf119Q9NWQ9 140 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 SOHLH2Q9NX45 425 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 MON2Q7Z3U7 1717 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 ARPC4-TTLL3A0A0A6YYG9 625 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 KIAA0513O60268 411 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 GRIN3BO60391 1043 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 MT-ND5P03915 603 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 NRIP1P48552 1158 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 RPP38P78345 283 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 NIPAL4Q0D2K0 466 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 PPP1R3AQ16821 1122 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 SLC39A4Q6P5W5 647 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 PSD4Q8NDX1 1056 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 RPLP0P6Q8NHW5 317 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 SLC22A17Q8WUG5 538 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 PEBP4Q96S96 227 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 RIPK3Q9Y572 518 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 CEPT1Q9Y6K0 416 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 LMO7Q8WWI1 1683 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 OXSR1O95747 527 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 EDNRAP25101 427 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 OR3A3P47888 321 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 OR3A2P47893 321 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 LEPRP48357 1165 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 CTBP2P56545 445 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 GALNT1Q10472 559 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 DUSP4Q13115 394 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 POM121L1PQ3SYA9 428 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 LINGO4Q6UY18 593 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 ZNF676Q8N7Q3 588 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 SETD6Q8TBK2 473 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 ASB12Q8WXK4 309 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 ZNF514Q96K75 400 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 PSKH2Q96QS6 385 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 MGLLQ99685 303 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 COPZ2Q9P299 210 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 UPK1BO75841 260 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 IL3P08700 152 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 DDX6P26196 483 aaKnown RBP eCLIP14.53□□□□□ -0.085e-9■■□□□ 13.9
SMARCA4-207ENST00000541122 CEBPGP53567 150 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 RHEBQ15382 184 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 ZNF227Q86WZ6 799 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 C1orf52Q8N6N3 182 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 NEK7Q8TDX7 302 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 OSTF1Q92882 214 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 CLIP3Q96DZ5 547 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 TBX5Q99593 518 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 RAB11FIP5Q9BXF6 653 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 EXO5Q9H790 373 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 STUB1Q9UNE7 303 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 SOBPA7XYQ1 873 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 CAPN5O15484 640 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 PRNPP04156 253 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 GNALP38405 381 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 CLCNKBP51801 687 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 SP140Q13342 867 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 IQCF2Q8IXL9 164 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 GDPD1Q8N9F7 314 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 OR2L3Q8NG85 312 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 ZNF597Q96LX8 424 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 C5orf34Q96MH7 638 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 LHPPQ9H008 270 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 BCAS3Q9H6U6 928 aa14.53□□□□□ -0.08
SMARCA4-207ENST00000541122 PLEKHA1Q9HB21 404 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms