RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PWP1Q13610 501 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 KRT33BQ14525 404 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 HKDC1Q2TB90 917 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 PGS1Q32NB8 556 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 PUS10Q3MIT2 529 aaKnown RBP11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 ICE2Q659A1 982 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 OR4F3Q6IEY1 312 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 TMIGD1Q6UXZ0 262 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 COMMD6Q7Z4G1 85 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 MMP21Q8N119 569 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 OR4K1Q8NGD4 311 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 JADE3Q92613 823 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 MIEF2Q96C03 454 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 OR52E6Q96RD3 313 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 CGREF1Q99674 301 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 MVB12BQ9H7P6 319 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 PELI2Q9HAT8 420 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 RUVBL1Q9Y265 456 aaKnown RBP11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 USP34Q70CQ2 3546 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 A0A1W2PPC4 97 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 RTCAO00442 366 aaKnown RBP11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 BTN3A3O00478 584 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 SCN2BO60939 215 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 FKBP6O75344 327 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 GSNP06396 782 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 LAMP1P11279 417 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 PIM1P11309 404 aaPredicted RBP11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 ACPPP15309 386 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 MAOBP27338 520 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 TIA1P31483 386 aaKnown RBP eCLIP11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 HSD17B2P37059 387 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 RABIFP47224 123 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 OR4D2P58180 307 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 MC1RQ01726 317 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 DMWDQ09019 674 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 ZNF385BQ569K4 471 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 PAGE2BQ5JRK9 111 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 PRMT9Q6P2P2 845 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 AAGABQ6PD74 315 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 LRRC74BQ6ZQY2 392 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 IFNEQ86WN2 208 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 PHACTR4Q8IZ21 702 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 LILRA2Q8N149 483 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 GLB1L3Q8NCI6 653 aaPredicted RBP11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 SLCO4A1Q96BD0 722 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 TESCQ96BS2 214 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 AURKBQ96GD4 344 aaPredicted RBP11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 ZNF717Q9BY31 904 aaPredicted RBP11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 REXO4Q9GZR2 422 aaKnown RBP11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 PRM3Q9NNZ6 103 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 PCOLCE2Q9UKZ9 415 aa11.77□□□□□ -0.52
AP003559.1-201ENST00000540906 DYTNA2CJ06 578 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 C4orf51C9J302 202 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 PPM1DO15297 605 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 PCDH7O60245 1069 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 IL6P05231 212 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 DCNP07585 359 aaKnown RBP11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 ANXA4P09525 319 aaPredicted RBP11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 HSD17B1P14061 328 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 MAPK1P28482 360 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 S100A3P33764 101 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 CCR8P51685 355 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 AP2B1P63010 937 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 PRDX1Q06830 199 aaKnown RBP11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 MTAPQ13126 283 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 C1orf61Q13536 156 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 LAPTM5Q13571 262 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 HIST2H2ACQ16777 129 aaPredicted RBP11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 MUM1Q2TAK8 710 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 PRRT3Q5FWE3 981 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 KIAA1614Q5VZ46 1190 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 HIST2H2AA3Q6FI13 130 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 WASH2PQ6VEQ5 465 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 ZNF551Q7Z340 670 aaPredicted RBP11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 SPATA24Q86W54 205 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 METTL4Q8N3J2 472 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 AMER3Q8N944 861 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 OR4E2Q8NGC2 313 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 REPS1Q96D71 796 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 F2RL3Q96RI0 385 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 MACROD1Q9BQ69 325 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 RHBGQ9H310 441 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 KIR3DX1Q9H7L2 352 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 CD320Q9NPF0 282 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 SPTY2D1-AS1A0A0U1RR47 76 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 ZNF839A8K0R7 811 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 GABRR3A8MPY1 467 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 PLPP1O14494 284 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 HAT1O14929 419 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 ARPC2O15144 300 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 C8BP07358 591 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 BCKDHBP21953 392 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 HRH2P25021 359 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 OXTRP30559 389 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 GCKP35557 465 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 BCL6P41182 706 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 PIK3CBP42338 1070 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 SNRPNP63162 240 aaKnown RBP11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 TRAP1Q12931 704 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms