RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ESAMQ96AP7 390 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 MVB12AQ96EY5 273 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 ALG9Q9H6U8 611 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 WDR54Q9H977 334 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 TUBD1Q9UJT1 453 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 ACOT9Q9Y305 439 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 DYRK1BQ9Y463 629 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 ASB1Q9Y576 335 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 A0A087X1B8 175 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 A0A096LPK6 155 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 A0A0A6YYC8 382 aaPredicted RBP16.06■□□□□ 0.16
CD9-209ENST00000540891 TRBC2A0A5B9 178 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 ARGFXA6NJG6 315 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 I3L1I5 382 aaPredicted RBP16.06■□□□□ 0.16
CD9-209ENST00000540891 TXNDC9O14530 226 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 RIPK2O43353 540 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 WDR47O94967 919 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 INHBAP08476 426 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 ABHD2P08910 425 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 MYBL2P10244 700 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 OTX2P32243 289 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 SERPINB8P50452 374 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 REEP5Q00765 189 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 ATP1A4Q13733 1029 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 FAM53BQ14153 422 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 SULT1C3Q6IMI6 304 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 TMEM214Q6NUQ4 689 aaKnown RBP16.06■□□□□ 0.16
CD9-209ENST00000540891 NXPE4Q6UWF7 544 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 PPP1R32Q7Z5V6 425 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 MRGPREQ86SM8 312 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 TMPRSS11BQ86T26 416 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 ASPGQ86U10 573 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 SHISA5Q8N114 240 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 TCAIMQ8N3R3 496 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 AMER3Q8N944 861 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 STAG3L4Q8TBR4 150 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 COL26A1Q96A83 441 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 GPR78Q96P69 363 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 EPB41L4BQ9H329 900 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 SOX17Q9H6I2 414 aaPredicted RBP16.06■□□□□ 0.16
CD9-209ENST00000540891 PELI2Q9HAT8 420 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 NMRAL1Q9HBL8 299 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 PTBP2Q9UKA9 531 aaKnown RBP16.06■□□□□ 0.16
CD9-209ENST00000540891 RNF112Q9ULX5 631 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 KCNE2Q9Y6J6 123 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 CCDC88CQ9P219 2028 aa16.06■□□□□ 0.16
CD9-209ENST00000540891 IGLV3-12A0A075B6K2 115 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 POC1B-GALNT4F8VUJ3 575 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 FFAR3O14843 346 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 GPR42O15529 346 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 OR1F1O43749 312 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 PRAMEF4O60810 478 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 KERAO60938 352 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 SFTPCP11686 197 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 MTHFD2P13995 350 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 VARSP26640 1264 aaKnown RBP16.05■□□□□ 0.16
CD9-209ENST00000540891 GCAP28676 217 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 TYK2P29597 1187 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 GRK3P35626 688 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 SCTRP47872 440 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 HSPA7P48741 367 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 DSG2Q14126 1118 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 TEX35Q5T0J7 233 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 PRAMEF9Q5VWM5 478 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 SLCO4C1Q6ZQN7 724 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 SHISA6Q6ZSJ9 500 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 TRMT10CQ7L0Y3 403 aaKnown RBP16.05■□□□□ 0.16
CD9-209ENST00000540891 PRSS41Q7RTY9 318 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 CCDC91Q7Z6B0 441 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 RAB43Q86YS6 212 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 PLD6Q8N2A8 252 aaKnown RBP16.05■□□□□ 0.16
CD9-209ENST00000540891 ANKRD53Q8N9V6 530 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 KCT2Q8NC54 265 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 CAMKVQ8NCB2 501 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 STT3BQ8TCJ2 826 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 SLC13A3Q8WWT9 602 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 EXT2Q93063 718 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 MOCOSQ96EN8 888 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 ABHD17AQ96GS6 310 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 DRC3Q9H069 523 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 SLC25A18Q9H1K4 315 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 WWOXQ9NZC7 414 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 ZNF180Q9UJW8 692 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 TLK1Q9UKI8 766 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 CDC14AQ9UNH5 594 aa16.05■□□□□ 0.16
CD9-209ENST00000540891 K7EM74 188 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 UBXN8O00124 270 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 ZNF500O60304 480 aaPredicted RBP16.04■□□□□ 0.16
CD9-209ENST00000540891 RFPL1O75677 317 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 EPORP19235 508 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 FBLP22087 321 aaKnown RBP16.04■□□□□ 0.16
CD9-209ENST00000540891 MSH2P43246 934 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 GLRBP48167 497 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 SERPINB9P50453 376 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 CDC16Q13042 620 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 SYT16Q17RD7 645 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 VWA2Q5GFL6 755 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 EIF1ADQ8N9N8 165 aaKnown RBP16.04■□□□□ 0.16
CD9-209ENST00000540891 OR9A4Q8NGU2 314 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 MMABQ96EY8 250 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms