RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 TMEM131Q92545 1883 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 BBIP1A8MTZ0 92 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 MAGEB17A8MXT2 336 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 SLC22A3O75751 556 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 CHRM5P08912 532 aaPredicted RBP13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 G6PDP11413 515 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 PRPS2P11908 318 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 HRH2P25021 359 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 MAPK1P28482 360 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 SERPINB1P30740 379 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 CSNK1EP49674 416 aaKnown RBP13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 HNRNPKP61978 463 aaKnown RBP eCLIP13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 YBX1P67809 324 aaKnown RBP13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 CUL3Q13618 768 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 DDX39BQ13838 428 aaKnown RBP13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 GPR18Q14330 331 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 TEAD4Q15561 434 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 CACHD1Q5VU97 1274 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 CYP20A1Q6UW02 462 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 ADGRF3Q8IZF5 1079 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 FAM9CQ8IZT9 166 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 RNF175Q8N4F7 328 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 FAM46DQ8NEK8 389 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 OR2L3Q8NG85 312 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 OR4E2Q8NGC2 313 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 FBXO27Q8NI29 283 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 SLC37A2Q8TED4 501 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 PATE1Q8WXA2 126 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 SLC22A18Q96BI1 424 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 CADM1Q9BY67 442 aaKnown RBP13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 RHBGQ9H310 441 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 ERVMER34-1Q9H9K5 563 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 MRPS30Q9NP92 439 aaKnown RBP13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 NMRK1Q9NWW6 199 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 IGF2RP11717 2491 aa13.68□□□□□ -0.22
CYB561A3-216ENST00000540755 A0A1B0GTW7 788 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 ANKRD28O15084 1053 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 GSC2O15499 205 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 MGRN1O60291 552 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 JAK1P23458 1154 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 CMPK1P30085 196 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 NME5P56597 212 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 UFM1P61960 85 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 RPS13P62277 151 aaKnown RBP13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 CSNK1G2P78368 415 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 MEF2AQ02078 507 aaPredicted RBP13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 KIR2DS3Q14952 304 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 PLCL1Q15111 1095 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 ADNP2Q6IQ32 1131 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 BLOC1S3Q6QNY0 202 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 PROKR1Q8TCW9 393 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 LMX1AQ8TE12 382 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 JPH3Q8WXH2 748 aaPredicted RBP13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 RCN3Q96D15 328 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 APIPQ96GX9 242 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 EFCAB1Q9HAE3 211 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 DMRT3Q9NQL9 472 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 TMEM184CQ9NVA4 438 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 NDE1Q9NXR1 346 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 SPHK1Q9NYA1 384 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 CHD6Q8TD26 2715 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 IGKV1-8A0A0C4DH67 115 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 LNP1A1A4G5 178 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 DYTNA2CJ06 578 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 FAM234BA2RU67 622 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 ISM1B1AKI9 464 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 H7BY64 318 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 BTN3A3O00478 584 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 AQP9O43315 295 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 NRP2O60462 931 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 KRT16P08779 473 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 BCKDHAP12694 445 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 GNSP15586 552 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 ITGAXP20702 1163 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 ZFP36L2P47974 494 aaKnown RBP13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 DHPSP49366 369 aaPredicted RBP13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 NUDT2P50583 147 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 ELF3P78545 371 aaPredicted RBP13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 RCAN2Q14206 197 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 SPIN4Q56A73 249 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 COQ5Q5HYK3 327 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 REP15Q6BDI9 236 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 CYB5D1Q6P9G0 228 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 CFAP47Q6ZTR5 3102 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 TMEM26Q6ZUK4 368 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 LIX1Q8N485 282 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 KYQ8NBH2 561 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 ZNF740Q8NDX6 193 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 ZNF548Q8NEK5 533 aaPredicted RBP13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 UTP4Q969X6 686 aaKnown RBP13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 C11orf24Q96F05 449 aaPredicted RBP13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 PRAP1Q96NZ9 151 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 SERPINI1Q99574 410 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 EDEM2Q9BV94 578 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 SARGQ9BW04 601 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 MRPL1Q9BYD6 325 aaKnown RBP13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 ACTL8Q9H568 366 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 SLC52A3Q9NQ40 469 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 SIRT5Q9NXA8 310 aa13.67□□□□□ -0.22
CYB561A3-216ENST00000540755 SUSD2Q9UGT4 822 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms