RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 RFPL2O75678 378 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 CDK1P06493 297 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 ITPKAP23677 461 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 GADD45AP24522 165 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 GGT2P36268 569 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 CRYBA2P53672 197 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 SP3Q02447 781 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 SLC13A2Q13183 592 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 TAF12Q16514 161 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 TIGD6Q17RP2 521 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 ATP13A5Q4VNC0 1218 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 LIPJQ5W064 366 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 GPR153Q6NV75 609 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 FAM124AQ86V42 546 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 KCNC2Q96PR1 638 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 NXF2Q9GZY0 626 aaKnown RBP11.88□□□□□ -0.51
NPC1-202ENST00000540608 CHST8Q9H2A9 424 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 ADPRHL2Q9NX46 363 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 VPS29Q9UBQ0 182 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 FZD4Q9ULV1 537 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 IGLV3-16A0A075B6K0 115 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 CLCA1A8K7I4 914 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 GREM1O60565 184 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 ZNF821O75541 412 aaPredicted RBP11.87□□□□□ -0.51
NPC1-202ENST00000540608 LAMP1P11279 417 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 SERPINA4P29622 427 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 RRM2P31350 389 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 SLC19A1P41440 591 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 SEMG2Q02383 582 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 COLEC12Q5KU26 742 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 TPRG1Q6ZUI0 275 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 SLC46A3Q7Z3Q1 461 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 DNAJC22Q8N4W6 341 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 AMER2Q8N7J2 671 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 PROX1Q92786 737 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 GGHQ92820 318 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 TRMT2BQ96GJ1 504 aaKnown RBP11.87□□□□□ -0.51
NPC1-202ENST00000540608 SLC22A12Q96S37 553 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 CLSTN3Q9BQT9 956 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 TSEN34Q9BSV6 310 aaKnown RBP11.87□□□□□ -0.51
NPC1-202ENST00000540608 DOHHQ9BU89 302 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 RUBCNLQ9H714 662 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 RUVBL1Q9Y265 456 aaKnown RBP11.87□□□□□ -0.51
NPC1-202ENST00000540608 BACE2Q9Y5Z0 518 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 TMEM229AB2RXF0 380 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 IGSF6O95976 241 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 EIF2S1P05198 315 aaKnown RBP11.87□□□□□ -0.51
NPC1-202ENST00000540608 NUDT7P0C024 238 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 CYP2A7P20853 494 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 PFN3P60673 137 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 ZNF45Q02386 682 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 PTSQ03393 145 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 SP140Q13342 867 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 CCDC92Q53HC0 331 aaPredicted RBP11.87□□□□□ -0.51
NPC1-202ENST00000540608 STEAP3Q658P3 488 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 LRRC66Q68CR7 880 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 Q6ZPB1 254 aaPredicted RBP11.87□□□□□ -0.51
NPC1-202ENST00000540608 VRK3Q8IV63 474 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 STARD8Q92502 1023 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 ASIC4Q96FT7 647 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 SCRN2Q96FV2 425 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 TXNDC15Q96J42 360 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 DUSP26Q9BV47 211 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 MRPL9Q9BYD2 267 aaKnown RBP11.87□□□□□ -0.51
NPC1-202ENST00000540608 SPATA6Q9NWH7 488 aaPredicted RBP11.87□□□□□ -0.51
NPC1-202ENST00000540608 SPASTQ9UBP0 616 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 SRRDQ9UH36 339 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 BTNL2Q9UIR0 455 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 CORO2BQ9UQ03 480 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 BTBD3Q9Y2F9 522 aa11.87□□□□□ -0.51
NPC1-202ENST00000540608 TBX1O43435 398 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 UGDHO60701 494 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 EFEMP2O95967 443 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 RPLP0P05388 317 aaKnown RBP11.86□□□□□ -0.51
NPC1-202ENST00000540608 ABCB1P08183 1280 aaPredicted RBP11.86□□□□□ -0.51
NPC1-202ENST00000540608 GSTT2P0CG29 244 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 GSTT2BP0CG30 244 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 PPIBP23284 216 aaKnown RBP11.86□□□□□ -0.51
NPC1-202ENST00000540608 TPTEP56180 551 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 AP1S2P56377 157 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 ZXDBP98169 803 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 FBXO43Q4G163 708 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 DGKKQ5KSL6 1271 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 PNCKQ6P2M8 343 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 TSEN54Q7Z6J9 526 aaKnown RBP11.86□□□□□ -0.51
NPC1-202ENST00000540608 WDR20Q8TBZ3 569 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 ADAMTS19Q8TE59 1207 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 HTRA1Q92743 480 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 SH3KBP1Q96B97 665 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 FEVQ99581 238 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 RAD9AQ99638 391 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 ATG10Q9H0Y0 220 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 MBD1Q9UIS9 605 aaPredicted RBP11.86□□□□□ -0.51
NPC1-202ENST00000540608 C1orf226A1L170 272 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 TNFRSF11BO00300 401 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 DSCR3O14972 297 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 PCGF2P35227 344 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 IRF8Q02556 426 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 RGNQ15493 299 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 HKDC1Q2TB90 917 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms