RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 GPATCH11Q8N954 259 aa14.23□□□□□ -0.13
USB1-203ENST00000539737 FAM45AQ8TCE6 357 aa14.23□□□□□ -0.13
USB1-203ENST00000539737 IFT81Q8WYA0 676 aa14.23□□□□□ -0.13
USB1-203ENST00000539737 CCDC120Q96HB5 630 aa14.23□□□□□ -0.13
USB1-203ENST00000539737 LURAP1Q96LR2 239 aa14.23□□□□□ -0.13
USB1-203ENST00000539737 FMO2Q99518 471 aa14.23□□□□□ -0.13
USB1-203ENST00000539737 LHPPQ9H008 270 aa14.23□□□□□ -0.13
USB1-203ENST00000539737 SYNPO2LQ9H987 977 aa14.23□□□□□ -0.13
USB1-203ENST00000539737 CUTCQ9NTM9 273 aa14.23□□□□□ -0.13
USB1-203ENST00000539737 PTGFRNQ9P2B2 879 aa14.23□□□□□ -0.13
USB1-203ENST00000539737 TXNDC16Q9P2K2 825 aa14.23□□□□□ -0.13
USB1-203ENST00000539737 TSR3Q9UJK0 312 aaKnown RBP14.23□□□□□ -0.13
USB1-203ENST00000539737 RUVBL2Q9Y230 463 aaKnown RBP14.23□□□□□ -0.13
USB1-203ENST00000539737 KLHL41O60662 606 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 CTSVO60911 334 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 MATN4O95460 622 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 CATP04040 527 aaKnown RBP14.22□□□□□ -0.13
USB1-203ENST00000539737 MPC1LP0DKB6 136 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 PIM1P11309 404 aaPredicted RBP14.22□□□□□ -0.13
USB1-203ENST00000539737 EEF1A2Q05639 463 aaKnown RBP14.22□□□□□ -0.13
USB1-203ENST00000539737 NAB1Q13506 487 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 GRB7Q14451 532 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 TLR1Q15399 786 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 KLHL38Q2WGJ6 581 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 CCSMST1Q4G0I0 132 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 ZC3H12BQ5HYM0 836 aaKnown RBP14.22□□□□□ -0.13
USB1-203ENST00000539737 RBM20Q5T481 1227 aaKnown RBP14.22□□□□□ -0.13
USB1-203ENST00000539737 ZNF324BQ6AW86 544 aaPredicted RBP14.22□□□□□ -0.13
USB1-203ENST00000539737 FRMPD2BQ6IN97 320 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 GFRALQ6UXV0 394 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 C3orf62Q6ZUJ4 267 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 LAPTM4BQ86VI4 370 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 RELL1Q8IUW5 271 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 IFT20Q8IY31 132 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 BRIX1Q8TDN6 353 aaKnown RBP14.22□□□□□ -0.13
USB1-203ENST00000539737 RAD51AP1Q96B01 352 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 MENTQ9BUN1 341 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 SPATA7Q9P0W8 599 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 GALPQ9UBC7 116 aa14.22□□□□□ -0.13
USB1-203ENST00000539737 LOC105369274A0A096LPK9 316 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 LOC102723532A0A0G2JNH3 316 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 FAM159BA6NKW6 160 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 ESPNB1AK53 854 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 RASGRF2O14827 1237 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 PCDH17O14917 1159 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 DSCR3O14972 297 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 UNC5CO95185 931 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 FKBP9O95302 570 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 C1orf105O95561 183 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 FDXRP22570 491 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 PHBP35232 272 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 BDKRB1P46663 353 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 EFNA3P52797 238 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 ARSFP54793 590 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 RIPPLY3P57055 190 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 VSX2P58304 361 aaPredicted RBP14.21□□□□□ -0.13
USB1-203ENST00000539737 GPX6P59796 221 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 SNRPNP63162 240 aaKnown RBP14.21□□□□□ -0.13
USB1-203ENST00000539737 ARG2P78540 354 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 KLC1Q07866 573 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 MFAP5Q13361 173 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 PDAP1Q13442 181 aaKnown RBP14.21□□□□□ -0.13
USB1-203ENST00000539737 NAA25Q14CX7 972 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 SF1Q15637 639 aaKnown RBP14.21□□□□□ -0.13
USB1-203ENST00000539737 ZXDCQ2QGD7 858 aaPredicted RBP14.21□□□□□ -0.13
USB1-203ENST00000539737 VWA2Q5GFL6 755 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 HECTD2Q5U5R9 776 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 ISLR2Q6UXK2 745 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 MRGPRGQ86SM5 289 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 ZC3HC1Q86WB0 502 aaKnown RBP14.21□□□□□ -0.13
USB1-203ENST00000539737 CPNE9Q8IYJ1 553 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 OR4N4Q8N0Y3 316 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 OR2L8Q8NGY9 312 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 PSMF1Q92530 271 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 SLC30A3Q99726 388 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 CPNE1Q99829 537 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 CRB3Q9BUF7 120 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 RHOJQ9H4E5 214 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 EPS8L2Q9H6S3 715 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 VWA7Q9Y334 891 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 PSAT1Q9Y617 370 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 NFS1Q9Y697 457 aa14.21□□□□□ -0.13
USB1-203ENST00000539737 FAM95CA0A1B0GW59 222 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 DIAPH2O60879 1101 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 PSIP1O75475 530 aaKnown RBP14.2□□□□□ -0.14
USB1-203ENST00000539737 RHOXF2BP0C7M4 288 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 HTR1EP28566 365 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 ECHS1P30084 290 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 GP5P40197 560 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 CDKN2DP55273 166 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 SP140Q13342 867 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 TCTE1Q5JU00 501 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 IRAK1BP1Q5VVH5 260 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 FIGLAQ6QHK4 219 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 CTAGE3PQ8IX95 158 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 ZNF295-AS1Q8N0V1 137 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 MYO1HQ8N1T3 1032 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 BCORP1Q8N888 145 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 TTC29Q8NA56 475 aaPredicted RBP14.2□□□□□ -0.14
USB1-203ENST00000539737 FBXO15Q8NCQ5 510 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms