RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 HUS1BQ8NHY5 278 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 PROX1Q92786 737 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 PKP4Q99569 1192 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 DUSP26Q9BV47 211 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 HERC2P3Q9BVR0 1158 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 TRIT1Q9H3H1 467 aaKnown RBP13.57□□□□□ -0.24
UBE3B-210ENST00000539599 MAGIXQ9H6Y5 334 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 GPN2Q9H9Y4 310 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-210ENST00000539599 KRT84Q9NSB2 600 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 TMEM9Q9P0T7 183 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 SLC25A13Q9UJS0 675 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 SAMD4AQ9UPU9 718 aaKnown RBP13.57□□□□□ -0.24
UBE3B-210ENST00000539599 EXO1Q9UQ84 846 aaKnown RBP13.57□□□□□ -0.24
UBE3B-210ENST00000539599 NOTCH4Q99466 2003 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 KIAA0100Q14667 2235 aaKnown RBP13.57□□□□□ -0.24
UBE3B-210ENST00000539599 HIDE1A8MVS5 230 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 FAM20BO75063 409 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 IMPA1P29218 277 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 RRM2P31350 389 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 RAVER1Q8IY67 606 aaKnown RBP13.57□□□□□ -0.24
UBE3B-210ENST00000539599 ZNF740Q8NDX6 193 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 SPPL2AQ8TCT8 520 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 ING5Q8WYH8 240 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 RNF208Q9H0X6 261 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 RNF167Q9H6Y7 350 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 GPATCH2Q9NW75 528 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 TRNAU1APQ9NX07 287 aaKnown RBP13.57□□□□□ -0.24
UBE3B-210ENST00000539599 POP4O95707 220 aaKnown RBP13.56□□□□□ -0.24
UBE3B-210ENST00000539599 TGFB1P01137 390 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 CRATP43155 626 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 SLC35A2P78381 396 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 SLC7A9P82251 487 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 MTAPQ13126 283 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 STARD3Q14849 445 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 MAPK11Q15759 364 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 GGTA1PQ4G0N0 100 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 APH1BQ8WW43 257 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 RORBQ92753 470 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 DNASE1L2Q92874 299 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 SH3YL1Q96HL8 342 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-210ENST00000539599 ZSWIM3Q96MP5 696 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 RDH12Q96NR8 316 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 HHIPQ96QV1 700 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 OR51B5Q9H339 312 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 GULP1Q9UBP9 304 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 BLOC1S6Q9UL45 172 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 PLAGL1Q9UM63 463 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 GMEB1Q9Y692 573 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 TMEM247A6NEH6 219 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 PRAMEF25A6NGN4 478 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 FAM227AF5H4B4 570 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 WBP4O75554 376 aaKnown RBP13.56□□□□□ -0.24
UBE3B-210ENST00000539599 PRPS1L1P21108 318 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 RPP38P78345 283 aaKnown RBP13.56□□□□□ -0.24
UBE3B-210ENST00000539599 SMU1Q2TAY7 513 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 SERPINA11Q86U17 422 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 CPXM2Q8N436 756 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 OR7G3Q8NG95 312 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 ZNF689Q96CS4 500 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-210ENST00000539599 RUBCNLQ9H714 662 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 TAS2R16Q9NYV7 291 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 RHCGQ9UBD6 479 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 PCM1Q15154 2024 aa13.56□□□□□ -0.24
UBE3B-210ENST00000539599 FUOMA2VDF0 154 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 GRM6O15303 877 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 FGF18O76093 207 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 NADKO95544 446 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-210ENST00000539599 TIMP2P16035 220 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 SLC19A1P41440 591 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 CRISP3P54108 245 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 CYP4F2P78329 520 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 DNASE1L3Q13609 305 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 CLCA4Q14CN2 919 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 DEFB115Q30KQ5 88 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 IQCCQ4KMZ1 466 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 PAGE2BQ5JRK9 111 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 DDX53Q86TM3 631 aaKnown RBP13.55□□□□□ -0.24
UBE3B-210ENST00000539599 CACUL1Q86Y37 369 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 SFTPA1Q8IWL2 248 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 CACTIN-AS1Q8N1I8 211 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 SLAIN1Q8ND83 568 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 WDR48Q8TAF3 677 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 COX4I2Q96KJ9 171 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 IL17FQ96PD4 163 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 YME1L1Q96TA2 773 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 ACAT2Q9BWD1 397 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 TM9SF3Q9HD45 589 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 PCYT1BQ9Y5K3 369 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-210ENST00000539599 DENND4CQ5VZ89 1909 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 SCAMP2O15127 329 aaKnown RBP13.55□□□□□ -0.24
UBE3B-210ENST00000539599 SEMG1P04279 462 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 GPX2P18283 190 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 ITIH1P19827 911 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 DNAJA1P31689 397 aaKnown RBP13.55□□□□□ -0.24
UBE3B-210ENST00000539599 RYKP34925 604 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 HNMTP50135 292 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 GABARAPL2P60520 117 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 HBA1P69905 142 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 KCNJ10P78508 379 aa13.55□□□□□ -0.24
UBE3B-210ENST00000539599 MAD2L1BPQ15013 274 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms