RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 LINC00523Q86TU6 105 aa13.78□□□□□ -0.2
CCDC144NL-202ENST00000539177 MAGEC3Q8TD91 643 aa13.78□□□□□ -0.2
CCDC144NL-202ENST00000539177 SMPDL3AQ92484 453 aa13.78□□□□□ -0.2
CCDC144NL-202ENST00000539177 CDCP1Q9H5V8 836 aa13.78□□□□□ -0.2
CCDC144NL-202ENST00000539177 CCM2LQ9NUG4 571 aaPredicted RBP13.78□□□□□ -0.2
CCDC144NL-202ENST00000539177 RNF6Q9Y252 685 aa13.78□□□□□ -0.2
CCDC144NL-202ENST00000539177 PCDHA3Q9Y5H8 950 aa13.78□□□□□ -0.2
CCDC144NL-202ENST00000539177 NIPBLQ6KC79 2804 aaeCLIP13.77□□□□□ -0.2
CCDC144NL-202ENST00000539177 ARHGEF33A8MVX0 844 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 SLC25A12O75746 678 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 CDC123O75794 336 aaPredicted RBP13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 PTMAP06454 111 aaKnown RBP13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 EZRP15311 586 aaKnown RBP13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 PTGS2P35354 604 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 ACVR1Q04771 509 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 TFF3Q07654 80 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 FAM53BQ14153 422 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 EXT1Q16394 746 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 SFT2D3Q587I9 215 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 AARS2Q5JTZ9 985 aaKnown RBP13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 ICE2Q659A1 982 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 DMRTC2Q8IXT2 367 aaPredicted RBP13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 RPRMLQ8N4K4 120 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 SLC5A8Q8N695 610 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 HORMAD2Q8N7B1 307 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 OR9A1PQ8NGU1 263 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 OR51Q1Q8NH59 317 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 FAM57AQ8TBR7 257 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 M1APQ8TC57 530 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 MACROD1Q9BQ69 325 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 ZNF407Q9C0G0 2248 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 P2RY12Q9H244 342 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 MMP25Q9NPA2 562 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 TCAF1Q9Y4C2 921 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 HRH3Q9Y5N1 445 aa13.77□□□□□ -0.21
CCDC144NL-202ENST00000539177 DNAJC13O75165 2243 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 EML6Q6ZMW3 1958 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 SGK494L7N484 410 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 TXNDC9O14530 226 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 TFECO14948 347 aaPredicted RBP13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 NME2P1O60361 137 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 TOXO94900 526 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 ZWINTO95229 277 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 ERGP11308 486 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 PKMP14618 531 aaKnown RBP13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 NME2P22392 152 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 ADRA1DP25100 572 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 MSX1P28360 303 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 TTPAP49638 278 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 AGTR2P50052 363 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 RWDD2BP57060 319 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 TAS2R50P59544 299 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 ACTN3Q08043 901 aaPredicted RBP13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 ANKRD20A4Q4UJ75 823 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 CTSL3PQ5NE16 218 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 CCDC71Q8IV32 467 aaPredicted RBP13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 KIF2BQ8N4N8 673 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 OTUD6BQ8N6M0 293 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 CHDHQ8NE62 594 aaPredicted RBP13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 ZCCHC10Q8TBK6 192 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 ASB5Q8WWX0 329 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 ALG3Q92685 438 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 ABCA2Q9BZC7 2435 aa13.76□□□□□ -0.21
CCDC144NL-202ENST00000539177 ABCA4P78363 2273 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 H0YIG0 161 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 NDC80O14777 642 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 KPNA5O15131 536 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 CD3EAPO15446 510 aaKnown RBP13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 NIPSNAP2O75323 286 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 RDH16O75452 317 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 NDUFS3O75489 264 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 ZNF189O75820 626 aaPredicted RBP13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 CCNDBP1O95273 360 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 NSA2O95478 260 aaKnown RBP13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 TPP2P29144 1249 aaPredicted RBP13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 CHRNB4P30926 498 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 CETN2P41208 172 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 MEOX1P50221 254 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 PNLIPRP1P54315 467 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 PRDX1Q06830 199 aaKnown RBP13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 FOXD4Q12950 439 aaPredicted RBP13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 PTK6Q13882 451 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 USP10Q14694 798 aaKnown RBP13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 ABRAXAS2Q15018 415 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 CEBPEQ15744 281 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 CES4AQ5XG92 561 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 PPHLN1Q8NEY8 458 aaKnown RBP13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 LILRB4Q8NHJ6 448 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 RND1Q92730 232 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 TSLPQ969D9 159 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 PKP4Q99569 1192 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 LPAR4Q99677 370 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 FOXC2Q99958 501 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 CXXC4Q9H2H0 198 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 LIME1Q9H400 295 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 KCNJ16Q9NPI9 418 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 UTP6Q9NYH9 597 aaKnown RBP13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 RIMKLBQ9ULI2 386 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 PCDHA13Q9Y5I0 950 aa13.75□□□□□ -0.21
CCDC144NL-202ENST00000539177 FAM221AA4D161 298 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms