RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 FRMPD2BQ6IN97 320 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 LAS2Q8IYD9 372 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 D2HGDHQ8N465 521 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 OR7G3Q8NG95 312 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 SARGQ9BW04 601 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 PITHD1Q9GZP4 211 aaPredicted RBP22.49■■□□□ 1.19
TMEM260-202ENST00000538838 PNPOQ9NVS9 261 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 MARCOQ9UEW3 520 aaPredicted RBP22.49■■□□□ 1.19
TMEM260-202ENST00000538838 PCDHGA4Q9Y5G9 962 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 PCDHGA11Q9Y5H2 935 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 MT-CO3P00414 261 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 STATHP02808 62 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 GABRA4P48169 554 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 DDX39BQ13838 428 aaKnown RBP22.49■■□□□ 1.19
TMEM260-202ENST00000538838 RNF175Q8N4F7 328 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 TBC1D19Q8N5T2 526 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 MFSD9Q8NBP5 474 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 WDR20Q8TBZ3 569 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 UBE2E3Q969T4 207 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 MTFMTQ96DP5 389 aaKnown RBP22.49■■□□□ 1.19
TMEM260-202ENST00000538838 OR2A5Q96R48 311 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 CHRNA10Q9GZZ6 450 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 NT5DC2Q9H857 520 aa22.49■■□□□ 1.19
TMEM260-202ENST00000538838 FARSBQ9NSD9 589 aaKnown RBP22.49■■□□□ 1.19
TMEM260-202ENST00000538838 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.49■■□□□ 1.19
TMEM260-202ENST00000538838 PTPRBP23467 1997 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 LOC105369274A0A096LPK9 316 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 LOC102723532A0A0G2JNH3 316 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 DCDC2BA2VCK2 349 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 MANBAO00462 879 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 HGSO14964 777 aaPredicted RBP22.48■■□□□ 1.19
TMEM260-202ENST00000538838 MAP3K7O43318 606 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 CSO75390 466 aaKnown RBP22.48■■□□□ 1.19
TMEM260-202ENST00000538838 FGF4P08620 206 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 KITP10721 976 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 UROSP10746 265 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 FOLR1P15328 257 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 RPL14P50914 215 aaKnown RBP22.48■■□□□ 1.19
TMEM260-202ENST00000538838 NEK2P51955 445 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 RELAQ04206 551 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 GPR19Q15760 415 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 ISXQ2M1V0 245 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 SGO1Q5FBB7 561 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 FRG2Q64ET8 278 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 VN1R5Q7Z5H4 357 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 OR4N4Q8N0Y3 316 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 FRG2BQ96QU4 278 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 HBEGFQ99075 208 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 ELOVL6Q9H5J4 265 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 SNX6Q9UNH7 406 aa22.48■■□□□ 1.19
TMEM260-202ENST00000538838 CTSBP07858 339 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 SDHBP21912 280 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 GNGT1P63211 74 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 IFT88Q13099 833 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 ZC3H12BQ5HYM0 836 aaKnown RBP22.47■■□□□ 1.19
TMEM260-202ENST00000538838 TMTC4Q5T4D3 741 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 VN1R4Q7Z5H5 301 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 CRLF3Q8IUI8 442 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 CLYBLQ8N0X4 340 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 REPS1Q96D71 796 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 MTERF1Q99551 399 aaKnown RBP22.47■■□□□ 1.19
TMEM260-202ENST00000538838 PRM3Q9NNZ6 103 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 ZFP69BQ9UJL9 534 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 CLCA2Q9UQC9 943 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 DNAJC15Q9Y5T4 150 aa22.47■■□□□ 1.19
TMEM260-202ENST00000538838 H0YGG7 62 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 EDF1O60869 148 aaKnown RBP22.46■■□□□ 1.19
TMEM260-202ENST00000538838 SKAP2O75563 359 aaPredicted RBP22.46■■□□□ 1.19
TMEM260-202ENST00000538838 PDYNP01213 254 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 KRT6AP02538 564 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 KRT6BP04259 564 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 VIMP08670 466 aaKnown RBP22.46■■□□□ 1.19
TMEM260-202ENST00000538838 CSTF2P33240 577 aaKnown RBP eCLIP22.46■■□□□ 1.19
TMEM260-202ENST00000538838 AHRP35869 848 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 KRT6CP48668 564 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 VSX2P58304 361 aaPredicted RBP22.46■■□□□ 1.19
TMEM260-202ENST00000538838 ARF3P61204 181 aaPredicted RBP22.46■■□□□ 1.19
TMEM260-202ENST00000538838 UGT3A2Q3SY77 523 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 SCIMPQ6UWF3 145 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 MCATQ8IVS2 390 aaKnown RBP22.46■■□□□ 1.19
TMEM260-202ENST00000538838 HUS1BQ8NHY5 278 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 TWIST2Q8WVJ9 160 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 SELENOMQ8WWX9 145 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 DEPDC7Q96QD5 511 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 MACROD1Q9BQ69 325 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 RHBGQ9H310 441 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 SIDT1Q9NXL6 827 aaKnown RBP22.46■■□□□ 1.19
TMEM260-202ENST00000538838 PLCL2Q9UPR0 1127 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 PTGDR2Q9Y5Y4 395 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 AP1M2Q9Y6Q5 423 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 PIEZO1Q92508 2521 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 ANKDD1BA6NHY2 528 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 P2RX6O15547 441 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 HYAL3O43820 417 aaPredicted RBP22.46■■□□□ 1.19
TMEM260-202ENST00000538838 SERPIND1P05546 499 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 ABRAXAS2Q15018 415 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 PDCD2Q16342 344 aaPredicted RBP22.46■■□□□ 1.19
TMEM260-202ENST00000538838 AGBL5Q8NDL9 886 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 CCT6BQ92526 530 aa22.46■■□□□ 1.19
TMEM260-202ENST00000538838 USP7Q93009 1102 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms