RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 MEAF6Q9HAF1 191 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 KCNK13Q9HB14 408 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 TCF7L2Q9NQB0 619 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 RIC8BQ9NVN3 520 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 DNAAF2Q9NVR5 837 aaKnown RBP13.58□□□□□ -0.24
CD4-208ENST00000538827 GIMAP2Q9UG22 337 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 KLHL3Q9UH77 587 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 G3BP2Q9UN86 482 aaKnown RBP13.58□□□□□ -0.24
CD4-208ENST00000538827 PCDHGA11Q9Y5H2 935 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 NBEAQ8NFP9 2946 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 IGHV1OR21-1A0A087WYE8 117 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 IGKV1-8A0A0C4DH67 115 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 H0YIV9 168 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 SLC28A1O00337 649 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 FLRT2O43155 660 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 RGS14O43566 566 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 SH3BGRLO75368 114 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 SERPIND1P05546 499 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 GRIA3P42263 894 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 CASP2P42575 452 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 GRK6P43250 576 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 GFERP55789 205 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 HMGCS1Q01581 520 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 PCDH1Q08174 1060 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 NAA25Q14CX7 972 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 PERM1Q5SV97 790 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 TMIGD1Q6UXZ0 262 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 SPRED1Q7Z699 444 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 PAQR7Q86WK9 346 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 FAM129CQ86XR2 697 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 CHCHD4Q8N4Q1 142 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 FAM181AQ8N9Y4 354 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 ABHD11Q8NFV4 315 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 OR6C4Q8NGE1 309 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 IFI44Q8TCB0 444 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 USP7Q93009 1102 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 NAT6Q93015 286 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 CNDP2Q96KP4 475 aaKnown RBP13.57□□□□□ -0.24
CD4-208ENST00000538827 MARK4Q96L34 752 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 C3orf30Q96M34 536 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 MTERF1Q99551 399 aaKnown RBP13.57□□□□□ -0.24
CD4-208ENST00000538827 ABCG4Q9H172 646 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 TMEM9BQ9NQ34 198 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 TMEM184CQ9NVA4 438 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 FTSJ1Q9UET6 329 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 SNX7Q9UNH6 387 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 PCDHGB2Q9Y5G2 931 aa13.57□□□□□ -0.24
CD4-208ENST00000538827 MDC1Q14676 2089 aaKnown RBP13.56□□□□□ -0.24
CD4-208ENST00000538827 LY6G6EA0A0G2JKS1 128 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 TRBC2A0A5B9 178 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 CAPN5O15484 640 aaPredicted RBP13.56□□□□□ -0.24
CD4-208ENST00000538827 OR1F1O43749 312 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 RRP9O43818 475 aaKnown RBP13.56□□□□□ -0.24
CD4-208ENST00000538827 FKBP9O95302 570 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 STATHP02808 62 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 HRH2P25021 359 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 GPR3P46089 330 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 LSSP48449 732 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 DUSP3P51452 185 aaPredicted RBP13.56□□□□□ -0.24
CD4-208ENST00000538827 RPS13P62277 151 aaKnown RBP13.56□□□□□ -0.24
CD4-208ENST00000538827 PROX2Q3B8N5 592 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 GALNTL6Q49A17 601 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 ATP6AP1LQ52LC2 224 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 XKR7Q5GH72 579 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 SPDYAQ5MJ70 313 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 SNAP47Q5SQN1 464 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 FIGLAQ6QHK4 219 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 C19orf47Q8N9M1 422 aaKnown RBP13.56□□□□□ -0.24
CD4-208ENST00000538827 OR7G3Q8NG95 312 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 OR2T11Q8NH01 316 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 HUS1BQ8NHY5 278 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 WDR20Q8TBZ3 569 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 CATSPER2Q96P56 530 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 CCDC3Q9BQI4 270 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 CCDC28BQ9BUN5 200 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 EPB41L1Q9H4G0 881 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 SOHLH2Q9NX45 425 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 ANKMY1Q9P2S6 941 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 HEY2Q9UBP5 337 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 SLC12A4Q9UP95 1085 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 WASF3Q9UPY6 502 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 U3KQA8 63 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 DMXL2Q8TDJ6 3036 aa13.56□□□□□ -0.24
CD4-208ENST00000538827 COL5A1P20908 1838 aaPredicted RBP13.55□□□□□ -0.24
CD4-208ENST00000538827 RP1P56715 2156 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 ANKDD1BA6NHY2 528 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 PEX11AO75192 247 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 VPS4BO75351 444 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 RASSF9O75901 435 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 DCTN3O75935 186 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 LDOC1O95751 146 aaPredicted RBP13.55□□□□□ -0.24
CD4-208ENST00000538827 RPLP0P05388 317 aaKnown RBP13.55□□□□□ -0.24
CD4-208ENST00000538827 NCF2P19878 526 aaPredicted RBP13.55□□□□□ -0.24
CD4-208ENST00000538827 CSF2RBP32927 897 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 BCL6P41182 706 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 MLLT3P42568 568 aaPredicted RBP13.55□□□□□ -0.24
CD4-208ENST00000538827 RPL38P63173 70 aaKnown RBP13.55□□□□□ -0.24
CD4-208ENST00000538827 GPLD1P80108 840 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 CSTF3Q12996 717 aaKnown RBP13.55□□□□□ -0.24
CD4-208ENST00000538827 E2F2Q14209 437 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms