RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SOD1P00441 154 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 HSD3B1P14060 373 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 HSD3B2P26439 372 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 AQP1P29972 269 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 DAPP51397 102 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 CASP9P55211 416 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 ZBTB46Q86UZ6 589 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 TERB1Q8NA31 727 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 MYOCQ99972 504 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 DGCR6LQ9BY27 220 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 BAG5Q9UL15 447 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 TCF20Q9UGU0 1960 aaKnown RBP24■■□□□ 1.43
RAB40C-204ENST00000538492 SLC1A7O00341 560 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 SAP18O00422 153 aaKnown RBP24■■□□□ 1.43
RAB40C-204ENST00000538492 XYLBO75191 536 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 FGBP02675 491 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 SRPRAP08240 638 aaKnown RBP24■■□□□ 1.43
RAB40C-204ENST00000538492 HOXB6P17509 224 aaKnown RBP24■■□□□ 1.43
RAB40C-204ENST00000538492 GSTM2P28161 218 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 ARHGDIAP52565 204 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 GAB1Q13480 694 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 ERICH5Q6P6B1 374 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 PIK3C3Q8NEB9 887 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 CHTF18Q8WVB6 975 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 TM9SF3Q9HD45 589 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 PAK1IP1Q9NWT1 392 aaPredicted RBP24■■□□□ 1.43
RAB40C-204ENST00000538492 BLOC1S6Q9UL45 172 aa24■■□□□ 1.43
RAB40C-204ENST00000538492 SLC16A6O15403 523 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 GRSF1Q12849 480 aaKnown RBP eCLIP23.99■■□□□ 1.431e-7■■■■□ 24.1
RAB40C-204ENST00000538492 RFX4Q33E94 735 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 MED27Q6P2C8 311 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 HORMAD1Q86X24 394 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 B4GALNT2Q8NHY0 566 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 NRBF2Q96F24 287 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 ZFYVE19Q96K21 471 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 COQ10AQ96MF6 247 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 CCDC90BQ9GZT6 254 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 CHD9Q3L8U1 2897 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 PRRT4C9JH25 899 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 SLC9A3R1O14745 358 aaPredicted RBP23.99■■□□□ 1.43
RAB40C-204ENST00000538492 XPNPEP2O43895 674 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 PCDH7O60245 1069 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 ZNF182P17025 639 aaPredicted RBP23.99■■□□□ 1.43
RAB40C-204ENST00000538492 IDSP22304 550 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 VIPR2P41587 438 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 ASMTP46597 345 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 MEF2AQ02078 507 aaPredicted RBP23.99■■□□□ 1.43
RAB40C-204ENST00000538492 NLRP8Q86W28 1048 aa23.99■■□□□ 1.43
RAB40C-204ENST00000538492 PDP1Q9P0J1 537 aaPredicted RBP23.99■■□□□ 1.43
RAB40C-204ENST00000538492 FAF1Q9UNN5 650 aaPredicted RBP23.99■■□□□ 1.43
RAB40C-204ENST00000538492 MRPS23Q9Y3D9 190 aaKnown RBP23.99■■□□□ 1.43
RAB40C-204ENST00000538492 PLA2G16P53816 162 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 C21orf58P58505 322 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 SPIN4Q56A73 249 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 RAET1GQ6H3X3 334 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 CAPN13Q6MZZ7 669 aaPredicted RBP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 ANGPTL8Q6UXH0 198 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 CBLL1Q75N03 491 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 NPAS3Q8IXF0 933 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 NRSN1Q8IZ57 195 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 PGBD3Q8N328 593 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 VPS37AQ8NEZ2 397 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 STARD8Q92502 1023 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 SEMG1P04279 462 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 NPPBP16860 134 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 TIA1P31483 386 aaKnown RBP eCLIP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 HPCAL1P37235 193 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 CDK5R2Q13319 367 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 BIRC2Q13490 618 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 EIF3MQ7L2H7 374 aaKnown RBP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 TRMT11Q7Z4G4 463 aaKnown RBP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 ZC3H7AQ8IWR0 971 aaKnown RBP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 KLHDC8AQ8IYD2 350 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 SYNPOQ8N3V7 929 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 OR4K1Q8NGD4 311 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 EZH1Q92800 747 aaPredicted RBP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 RSPRY1Q96DX4 576 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 WARS2Q9UGM6 360 aaKnown RBP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 SAMHD1Q9Y3Z3 626 aaKnown RBP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 C1orf226A1L170 272 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 TLL1O43897 1013 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 CCNA2P20248 432 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 BNIP3Q12983 259 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 SLBPQ14493 270 aaKnown RBP eCLIP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 ZNF658BQ4V348 819 aaPredicted RBP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 ZC3H12BQ5HYM0 836 aaKnown RBP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 CNDP2Q96KP4 475 aaKnown RBP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 TMEM9Q9P0T7 183 aa23.98■■□□□ 1.43
RAB40C-204ENST00000538492 EXO1Q9UQ84 846 aaKnown RBP23.98■■□□□ 1.43
RAB40C-204ENST00000538492 TGFB1P01137 390 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 DNAJA1P31689 397 aaKnown RBP23.97■■□□□ 1.43
RAB40C-204ENST00000538492 GPR1P46091 355 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 SLC6A11P48066 632 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 TMBIM6P55061 237 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 GABARAPL2P60520 117 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 NFATC3Q12968 1075 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 ZNF385BQ569K4 471 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 GTF2IRD2BQ6EKJ0 949 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 CRTC3Q6UUV7 619 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms