RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 CDC14AQ9UNH5 594 aa12.59□□□□□ -0.39
COPS7A-207ENST00000538375 PADI2Q9Y2J8 665 aa12.59□□□□□ -0.39
COPS7A-207ENST00000538375 ANGPTL3Q9Y5C1 460 aa12.59□□□□□ -0.39
COPS7A-207ENST00000538375 PCDHGA6Q9Y5G7 932 aa12.59□□□□□ -0.39
COPS7A-207ENST00000538375 KCNE1BA0A087WTH5 132 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 TRBC2A0A5B9 178 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 TLDC2A0PJX2 215 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 FITM1A5D6W6 292 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 GOLGA8RI6L899 631 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 TERTO14746 1132 aaKnown RBP12.58□□□□□ -0.4
COPS7A-207ENST00000538375 IPO13O94829 963 aaKnown RBP12.58□□□□□ -0.4
COPS7A-207ENST00000538375 MED26O95402 600 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 CD63P08962 238 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 RBP1P09455 135 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 C1GALT1C1LP0DN25 315 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 COL6A2P12110 1019 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 CXCR2P25025 360 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 GGT5P36269 586 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 HSD17B3P37058 310 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 AGTR2P50052 363 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 CSRP3P50461 194 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 RHDQ02161 417 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 CDC20Q12834 499 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 NCF4Q15080 339 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 TSNAXIP1Q2TAA8 658 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 PRTGQ2VWP7 1150 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 XKR6Q5GH73 641 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 ZNF385CQ66K41 422 aaPredicted RBP12.58□□□□□ -0.4
COPS7A-207ENST00000538375 CAMKVQ8NCB2 501 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 ZNF740Q8NDX6 193 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 RHEBL1Q8TAI7 183 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 SNRNP27Q8WVK2 155 aaKnown RBP12.58□□□□□ -0.4
COPS7A-207ENST00000538375 EXTL1Q92935 676 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 MMABQ96EY8 250 aaPredicted RBP12.58□□□□□ -0.4
COPS7A-207ENST00000538375 PELI2Q9HAT8 420 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 FETUBQ9UGM5 382 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 TCFL5Q9UL49 500 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 PTRH2Q9Y3E5 179 aaKnown RBP12.58□□□□□ -0.4
COPS7A-207ENST00000538375 ANKRD12Q6UB98 2062 aa12.58□□□□□ -0.4
COPS7A-207ENST00000538375 SNRNP200O75643 2136 aaKnown RBP12.58□□□□□ -0.4
COPS7A-207ENST00000538375 A0A0A6YYC8 382 aaPredicted RBP12.57□□□□□ -0.4
COPS7A-207ENST00000538375 I3L1I5 382 aaPredicted RBP12.57□□□□□ -0.4
COPS7A-207ENST00000538375 P2RX6O15547 441 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 NDUFS4O43181 175 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 RFPL1O75677 317 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 CAPN1P07384 714 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 SLC35G6P0C7Q6 338 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 KRT15P19012 456 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 FBLP22087 321 aaKnown RBP12.57□□□□□ -0.4
COPS7A-207ENST00000538375 OTX2P32243 289 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 MAGEA12P43365 314 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 AVPR1BP47901 424 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 EMP3P54852 163 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 IFFO1Q0D2I5 559 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 TBR1Q16650 682 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 PDK4Q16654 411 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 GARNL3Q5VVW2 1013 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 WDR93Q6P2C0 686 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 PRMT9Q6P2P2 845 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 FAM198BQ6UWH4 519 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 TIFABQ6ZNK6 161 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 SLCO4C1Q6ZQN7 724 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 OVCH1Q7RTY7 1134 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 VN1R4Q7Z5H5 301 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 SYVN1Q86TM6 617 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 KRT78Q8N1N4 520 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 KCT2Q8NC54 265 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 ZCCHC10Q8TBK6 192 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 CCT6BQ92526 530 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 ISL2Q96A47 359 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 CATSPER2Q96P56 530 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 GPR78Q96P69 363 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 SPNS1Q9H2V7 528 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 GPRC5BQ9NZH0 403 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 OPTCQ9UBM4 332 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 KALRNO60229 2985 aa12.57□□□□□ -0.4
COPS7A-207ENST00000538375 A0A1W2PPM1 405 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 CCDC189A1A4V9 331 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 K7EPI3 171 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 PRPF4O43172 522 aaKnown RBP eCLIP12.56□□□□□ -0.4
COPS7A-207ENST00000538375 SMIM24O75264 130 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 FURINP09958 794 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 PYGBP11216 843 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 MTHFD2P13995 350 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 HNF4AP41235 474 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 FOLR3P41439 243 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 CCR10P46092 362 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 GCGRP47871 477 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 SCTRP47872 440 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 ALDH18A1P54886 795 aaKnown RBP12.56□□□□□ -0.4
COPS7A-207ENST00000538375 FOXL2P58012 376 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 IRF8Q02556 426 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 OCA2Q04671 838 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 RGS1Q08116 209 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 CHIT1Q13231 466 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 SLBPQ14493 270 aaKnown RBP eCLIP12.56□□□□□ -0.4
COPS7A-207ENST00000538375 HIST2H2ACQ16777 129 aaPredicted RBP12.56□□□□□ -0.4
COPS7A-207ENST00000538375 TECRLQ5HYJ1 363 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 ATG9BQ674R7 924 aa12.56□□□□□ -0.4
COPS7A-207ENST00000538375 HIST2H2AA3Q6FI13 130 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms