RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TRPV5Q9NQA5 729 aa6.96□□□□□ -1.3
MSH6-209ENST00000538136 USP36Q9P275 1121 aaKnown RBP6.96□□□□□ -1.3
MSH6-209ENST00000538136 EIF3LQ9Y262 564 aaKnown RBP6.96□□□□□ -1.3
MSH6-209ENST00000538136 TRAF6Q9Y4K3 522 aa6.96□□□□□ -1.3
MSH6-209ENST00000538136 A0A087X1B8 175 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 C2orf72A6NCS6 295 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 C19orf67A6NJJ6 358 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 AZIN1O14977 448 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 SHOX2O60902 331 aaPredicted RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 RFPL3O75679 317 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 AVPR1BP47901 424 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 GPR85P60893 370 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 MAPKAPK3Q16644 382 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 NDUFA9Q16795 377 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 TYSND1Q2T9J0 566 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 IL23RQ5VWK5 629 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 ICE2Q659A1 982 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 LCA5Q86VQ0 697 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 OR10Q1Q8NGQ4 319 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 GIMAP7Q8NHV1 300 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 DNAJB14Q8TBM8 379 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 AENQ8WTP8 325 aaKnown RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 RIC8BQ9NVN3 520 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 GIN1Q9NXP7 522 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 PSD3Q9NYI0 1048 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 SNX6Q9UNH7 406 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 ANGPT4Q9Y264 503 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 PIKFYVEQ9Y2I7 2098 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 USP9YO00507 2555 aaPredicted RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 KIR2DS5A0A0G2JLQ3 304 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 A0A0G2JNG1 304 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 KIR2DS3K7RE56 304 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 PSMD11O00231 422 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 ITM2AO43736 263 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 C8GP07360 202 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 ESRRAP11474 423 aaPredicted RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 FOLR1P15328 257 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 CRATP43155 626 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 KIR2DS5Q14953 304 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 TNFAIP8L2Q6P589 184 aaPredicted RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 ZNF765Q7L2R6 523 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 TRABD2AQ86V40 505 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 CACNA2D3Q8IZS8 1091 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 DDHD1Q8NEL9 900 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 ECHDC3Q96DC8 303 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 DEPDC7Q96QD5 511 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 CDC6Q99741 560 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 PRRX2Q99811 253 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 KDM4CQ9H3R0 1056 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 RUBCNLQ9H714 662 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 AKIRIN1Q9H9L7 192 aaPredicted RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 BAG5Q9UL15 447 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 TMPRSS11EQ9UL52 423 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 MRPS33Q9Y291 106 aaKnown RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 L3MBTL1Q9Y468 752 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 MAP4K5Q9Y4K4 846 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 TNPO3Q9Y5L0 923 aaKnown RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 URADA6NGE7 173 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 PIP5K1BO14986 540 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 ATXN7O15265 892 aaPredicted RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 C1orf105O95561 183 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 GLB1P16278 677 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 ITGAXP20702 1163 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 CERS1P27544 350 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 CTSKP43235 329 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 GSSP48637 474 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 PRLHRP49683 370 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 TAS2R50P59544 299 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 PLOD1Q02809 727 aaPredicted RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 ABHD18Q0P651 414 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 FZD5Q13467 585 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 LRP8Q14114 963 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 FAM214AQ32MH5 1076 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 PDZD3Q86UT5 571 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 ZGRF1Q86YA3 2104 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 TRIM42Q8IWZ5 723 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 BAHD1Q8TBE0 780 aaPredicted RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 DLG3Q92796 817 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 CCDC86Q9H6F5 360 aaKnown RBP6.95□□□□□ -1.3
MSH6-209ENST00000538136 COPG2Q9UBF2 871 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 HEY2Q9UBP5 337 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 C3orf18Q9UK00 162 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 PSME2Q9UL46 239 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 DTNAQ9Y4J8 743 aa6.95□□□□□ -1.3
MSH6-209ENST00000538136 PLXNA4Q9HCM2 1894 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 FRYQ5TBA9 3013 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 A0A088AWK7 358 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 WWP2O00308 870 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 EBAG9O00559 213 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 B4GAT1O43505 415 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 SCN2BO60939 215 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 ENO2P09104 434 aaPredicted RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 ZNF10P21506 573 aaPredicted RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 DLSTP36957 453 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 CSNK1DP48730 415 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 DGKQP52824 942 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 C3P1Q6ZMU1 363 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 GOLGA7Q7Z5G4 137 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 WDR5BQ86VZ2 330 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms