RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 ATG9BQ674R7 924 aa16.81■□□□□ 0.28
SNX17-210ENST00000537606 ZNF621Q6ZSS3 439 aa16.81■□□□□ 0.28
SNX17-210ENST00000537606 CLEC4FQ8N1N0 589 aa16.81■□□□□ 0.28
SNX17-210ENST00000537606 PACRGLQ8N7B6 248 aa16.81■□□□□ 0.28
SNX17-210ENST00000537606 PNPT1Q8TCS8 783 aaKnown RBP16.81■□□□□ 0.28
SNX17-210ENST00000537606 NCLNQ969V3 563 aa16.81■□□□□ 0.28
SNX17-210ENST00000537606 SH3KBP1Q96B97 665 aa16.81■□□□□ 0.28
SNX17-210ENST00000537606 FAM120BQ96EK7 910 aaKnown RBP16.81■□□□□ 0.28
SNX17-210ENST00000537606 SH3GL1Q99961 368 aa16.81■□□□□ 0.28
SNX17-210ENST00000537606 CD93Q9NPY3 652 aa16.81■□□□□ 0.28
SNX17-210ENST00000537606 TBC1D3DA0A087WVF3 549 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 TBC1D3IA0A087WXS9 549 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 TBC1D3EA0A087X179 549 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 TBC1D3KA0A087X1G2 549 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 TBC1D3FA6NER0 549 aaPredicted RBP16.8■□□□□ 0.28
SNX17-210ENST00000537606 CCDC160A6NGH7 325 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 TBC1D3LB9A6J9 549 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 FPGTO14772 594 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 SCN2BO60939 215 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 SNAP29O95721 258 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 TBC1D3HP0C7X1 549 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 PSMB5P28074 263 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 PPP1R8Q12972 351 aaKnown RBP16.8■□□□□ 0.28
SNX17-210ENST00000537606 LAPTM5Q13571 262 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 TBC1D3GQ6DHY5 549 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 TBC1D3CQ6IPX1 549 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 UNC5DQ6UXZ4 953 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 ARMCX6Q7L4S7 300 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 TBC1D3Q8IZP1 549 aaPredicted RBP16.8■□□□□ 0.28
SNX17-210ENST00000537606 FAM162AQ96A26 154 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 HHIPQ96QV1 700 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 PNPLA3Q9NST1 481 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 TAC3Q9UHF0 121 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 H3BNH8 94 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 UPK1AO00322 258 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 CXCR6O00574 342 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 AXIN1O15169 862 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 VILLO15195 856 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 CLOCKO15516 846 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 AHCYL1O43865 530 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 KLF8O95600 359 aaPredicted RBP16.8■□□□□ 0.28
SNX17-210ENST00000537606 DNTTP04053 509 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 HSD3B1P14060 373 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 HOXB9P17482 250 aaPredicted RBP16.8■□□□□ 0.28
SNX17-210ENST00000537606 KELP23276 732 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 HSD3B2P26439 372 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 CTHP32929 405 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 TRIM23P36406 574 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 ZNF33BQ06732 778 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 MTAPQ13126 283 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 E2F2Q14209 437 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 SLC30A9Q6PML9 568 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 DCUN1D3Q8IWE4 304 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 WDR48Q8TAF3 677 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 RMND5BQ96G75 393 aaPredicted RBP16.8■□□□□ 0.28
SNX17-210ENST00000537606 SLC17A9Q9BYT1 436 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 MYRFQ9Y2G1 1151 aa16.8■□□□□ 0.28
SNX17-210ENST00000537606 SMIM31A0A1B0GVY4 71 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 A0A1W2PQF6 199 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 KMOO15229 486 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 PI15O43692 258 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 PCDH7O60245 1069 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 RNGTTO60942 597 aaKnown RBP16.79■□□□□ 0.28
SNX17-210ENST00000537606 HOXB2P14652 356 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 ACPPP15309 386 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 RPS9P46781 194 aaKnown RBP16.79■□□□□ 0.28
SNX17-210ENST00000537606 CCR3P51677 355 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 RPS21P63220 83 aaKnown RBP16.79■□□□□ 0.28
SNX17-210ENST00000537606 RBBP5Q15291 538 aaKnown RBP16.79■□□□□ 0.28
SNX17-210ENST00000537606 HIST2H2ACQ16777 129 aaPredicted RBP16.79■□□□□ 0.28
SNX17-210ENST00000537606 ZIK1Q3SY52 487 aaPredicted RBP16.79■□□□□ 0.28
SNX17-210ENST00000537606 SLC36A3Q495N2 470 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 HIST2H2AA3Q6FI13 130 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 SDE2Q6IQ49 451 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 MICU2Q8IYU8 434 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 ZNF786Q8N393 782 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 OR5K2Q8NHB8 316 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 ZFP28Q8NHY6 868 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 NETO1Q8TDF5 533 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 NELL1Q92832 810 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 TMIGD2Q96BF3 282 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 EFCAB11Q9BUY7 163 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 SORBS1Q9BX66 1292 aaKnown RBP16.79■□□□□ 0.28
SNX17-210ENST00000537606 DMRT3Q9NQL9 472 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 SH3BP4Q9P0V3 963 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 SLC35G4P0C7Q5 338 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 GZMMP51124 257 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 MC1RQ01726 317 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 SRSF11Q05519 484 aaKnown RBP16.79■□□□□ 0.28
SNX17-210ENST00000537606 RPA4Q13156 261 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 HTR4Q13639 388 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 DUOXA1Q1HG43 343 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 PAGE2BQ5JRK9 111 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 TMBIM1Q969X1 311 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 REPS1Q96D71 796 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 CCDC115Q96NT0 180 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 DUSP26Q9BV47 211 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 GORASP2Q9H8Y8 452 aa16.79■□□□□ 0.28
SNX17-210ENST00000537606 CUEDC1Q9NWM3 386 aaPredicted RBP16.79■□□□□ 0.28
SNX17-210ENST00000537606 SCAMP2O15127 329 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms