RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 FGF10O15520 208 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 VIPP01282 170 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 OPN1SWP03999 348 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 GADD45AP24522 165 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 MC4RP32245 332 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CAPZA2P47755 286 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SSTP61278 116 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CDK5R2Q13319 367 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 USF2Q15853 346 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 PARP15Q460N3 678 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 MSANTD1Q6ZTZ1 278 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 DTX3Q8N9I9 347 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CLEC4CQ8WTT0 213 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 TNFAIP8L1Q8WVP5 186 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 MRPL48Q96GC5 212 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ST6GAL2Q96JF0 529 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 NLNQ9BYT8 704 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 C1orf109Q9NX04 203 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 PCDHA9Q9Y5H5 950 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 METTL21EPA6NDL7 271 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ADAMDEC1O15204 470 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SLC43A1O75387 559 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 TOXO94900 526 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SOX30O94993 753 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 LGI1O95970 557 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 DNTTP04053 509 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF286BP0CG31 522 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 FNTBP49356 437 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 OR4D2P58180 307 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ERVK-8P63133 956 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SETMARQ53H47 684 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ARHGAP15Q53QZ3 475 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 XKR6Q5GH73 641 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 GCNT6Q5T4J0 391 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SNX20Q7Z614 316 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 DDX53Q86TM3 631 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CHST13Q8NET6 341 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 OR52L1Q8NGH7 329 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 MAP6Q96JE9 813 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 HSH2DQ96JZ2 352 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 PGLYRP2Q96PD5 576 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 GAREM1Q9H706 876 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 FNIP2Q9P278 1114 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 BOLA1Q9Y3E2 137 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 OR2A25A4D2G3 310 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CXCL11O14625 94 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 NARSO43776 548 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 RFPL3O75679 317 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 PAHP00439 452 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 PCMT1P22061 227 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 LCN1P31025 176 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SLC11A2P49281 568 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SLC10A2Q12908 348 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 RAPSNQ13702 412 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 GTF2H2Q13888 395 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CPTPQ5TA50 214 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 RAB12Q6IQ22 244 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 GTF2H2CQ6P1K8 395 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 LCLAT1Q6UWP7 414 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 PGAP1Q75T13 922 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 LIMS2Q7Z4I7 341 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 UNC93AQ86WB7 457 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 LGI4Q8N135 537 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF433Q8N7K0 673 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 RIT1Q92963 219 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 TMEM125Q96AQ2 219 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 TREM1Q9NP99 234 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CREBZFQ9NS37 354 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 MARK1Q9P0L2 795 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 PRELID3BQ9Y3B1 194 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 TPST2O60704 377 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 RPP40O75818 363 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 GGT5P36269 586 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 MAP2K3P46734 347 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CEBPGP53567 150 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 DIO3P55073 304 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 NOL9Q5SY16 702 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 OR2T5Q6IEZ7 315 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CES5AQ6NT32 575 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 C16orf59Q7L2K0 433 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ADGRG3Q86Y34 549 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 OR2T29Q8NH02 315 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 RHEBL1Q8TAI7 183 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 GATAD2BQ8WXI9 593 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 OSMRQ99650 979 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ACTR6Q9GZN1 396 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ACOT13Q9NPJ3 140 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CNOT2Q9NZN8 540 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 UXTQ9UBK9 157 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 KIF25Q9UIL4 384 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 YARS2Q9Y2Z4 477 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 A0A1B0GTW7 788 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 OR51F1A6NGY5 319 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 MAGEB17A8MXT2 336 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SEPT4O43236 478 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 B4GALT4O60513 344 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 PAPSS2O95340 614 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 IFNW1P05000 195 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SLC6A4P31645 630 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ACSL1P33121 698 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms