RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 SCN2BO60939 215 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 SEMA3DO95025 777 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 CST1P01037 141 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 TFAP2AP05549 437 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 ARSFP54793 590 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 TMED1Q13445 227 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 LSAMPQ13449 338 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 DAG1Q14118 895 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 PON2Q15165 354 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 SHHQ15465 462 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 AGBL4Q5VU57 503 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 FOXB2Q5VYV0 432 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 TTC23Q5W5X9 447 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 EGFLAMQ63HQ2 1017 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 METRNLQ641Q3 311 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 FAM109BQ6ICB4 259 aaPredicted RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 KIAA1161Q6NSJ0 714 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 DOK6Q6PKX4 331 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 CRTC3Q6UUV7 619 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 MTSS1LQ765P7 747 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 HIPK1Q86Z02 1210 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 CHPFQ8IZ52 775 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 OR5K2Q8NHB8 316 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 PNPT1Q8TCS8 783 aaKnown RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 TFGQ92734 400 aaPredicted RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 EGLN2Q96KS0 407 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 RBM4BQ9BQ04 359 aaKnown RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 TBCDQ9BTW9 1192 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 TRMT61BQ9BVS5 477 aaKnown RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 RBM4Q9BWF3 364 aaKnown RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 RAB11FIP5Q9BXF6 653 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 IKZF5Q9H5V7 419 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 NT5DC2Q9H857 520 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 AASDHPPTQ9NRN7 309 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 IFT80Q9P2H3 777 aaPredicted RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 SCML1Q9UN30 329 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 VPS4AQ9UN37 437 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 PCDHGB4Q9UN71 923 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 USP22Q9UPT9 525 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 G3V2T6 193 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 DLGAP1O14490 977 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 KDM1AO60341 852 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 PCDH8O95206 1070 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 LRATO95237 230 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 DRD3P35462 400 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 MAGEA2P43356 314 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 ARHGDIAP52565 204 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 WNT3P56703 355 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 RPS13P62277 151 aaKnown RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 RPS21P63220 83 aaKnown RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 ELOAQ14241 798 aaKnown RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 NFE2L1Q14494 772 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 TEAD4Q15561 434 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 VMACQ2NL98 169 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMG6-203ENST00000536871 SDE2Q6IQ49 451 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 TTC33Q6PID6 262 aaPredicted RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 FAM47BQ8NA70 645 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 GOT1L1Q8NHS2 421 aaPredicted RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 FBXO30Q8TB52 745 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 MAGEE2Q8TD90 523 aaPredicted RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 TMBIM1Q969X1 311 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 RIPOR3Q96MK2 946 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 QRFPRQ96P65 431 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 INPP5KQ9BT40 448 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 EBPLQ9BY08 206 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 ASPSCR1Q9BZE9 553 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 TRIT1Q9H3H1 467 aaKnown RBP13.08□□□□□ -0.32
SMG6-203ENST00000536871 REEP4Q9H6H4 257 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 WDR26Q9H7D7 661 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 MYNNQ9NPC7 610 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 DMTF1Q9Y222 760 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 DPM1O60762 260 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 PRKD3O94806 890 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 BMP10O95393 424 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 SLC35G4P0C7Q5 338 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 ENGP17813 658 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 GDI1P31150 447 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 TRIM23P36406 574 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 RAE1P78406 368 aaKnown RBP13.07□□□□□ -0.32
SMG6-203ENST00000536871 GTDC1Q4AE62 458 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 SYCE2Q6PIF2 218 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 TMIGD1Q6UXZ0 262 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 ZNF621Q6ZSS3 439 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 C17orf64Q86WR6 236 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 CLEC4FQ8N1N0 589 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 METTL4Q8N3J2 472 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 ZNF513Q8N8E2 541 aaPredicted RBP13.07□□□□□ -0.32
SMG6-203ENST00000536871 OR7A2PQ8NGA2 310 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 OR5K1Q8NHB7 308 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 SMPDL3AQ92484 453 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 AIF1LQ9BQI0 150 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 TIMM29Q9BSF4 260 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 IGFLR1Q9H665 355 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 SLC28A3Q9HAS3 691 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 NTN4Q9HB63 628 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 BAG5Q9UL15 447 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 ORC6Q9Y5N6 252 aa13.07□□□□□ -0.32
SMG6-203ENST00000536871 TRIM64A6NGJ6 449 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 IGLON5A6NGN9 336 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms